Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 RPL35P6-201ENST00000490024 372 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 RPS15AP36-201ENST00000492022 382 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC023424.1-201ENST00000496058 459 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC068305.1-201ENST00000497406 726 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC011979.2-201ENST00000527568 352 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 DEFB108D-201ENST00000527787 222 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC125611.2-201ENST00000551907 647 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AL512360.1-201ENST00000555346 234 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC022726.1-201ENST00000587475 207 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AL590392.1-201ENST00000604960 446 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC008536.2-201ENST00000607284 349 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AC004817.4-201ENST00000602396 3625 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 A2MP1-204ENST00000566278 4130 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 LINC00622-201ENST00000562811 1570 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 AL022322.2-201ENST00000624072 20397 ntBASIC4.95□□□□□ -1.62
SYNPOQ8N3V7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 SMG1P4-204ENST00000523028 4131 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 NEAT1-202ENST00000501122 22743 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AL590240.1-201ENST00000334118 313 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 RNU6-1103P-201ENST00000384150 107 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 RNA5SP397-201ENST00000391323 118 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 MTCO3P12-201ENST00000416718 547 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 TIMM9P3-201ENST00000428659 274 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 GPR143P-201ENST00000434155 205 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AL450023.3-201ENST00000440592 271 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 BNIP3P2-201ENST00000441221 577 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 RPS4XP4-201ENST00000443195 763 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 TDGF1P1-201ENST00000445734 527 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC140076.1-201ENST00000449897 361 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 NANOGP10-201ENST00000453325 895 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC093278.1-201ENST00000494700 600 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AL110118.1-201ENST00000553543 400 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 BNIP3P5-201ENST00000562290 498 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC098848.2-201ENST00000588023 330 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC068790.5-201ENST00000602741 355 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC020910.2-201ENST00000603635 610 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AL391646.1-201ENST00000603860 190 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AL034351.1-201ENST00000605288 668 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 OR56B2P-202ENST00000641377 2453 ntBASIC4.94□□□□□ -1.62
SYNPOQ8N3V7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 SNORD56.2-201ENST00000363242 71 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 RNU6-1155P-201ENST00000363554 107 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 RNU6-1090P-201ENST00000364065 94 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 RNU6-169P-201ENST00000365336 107 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 RNA5SP235-201ENST00000365411 114 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 Y_RNA.450-201ENST00000384198 113 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 U3.30-201ENST00000391308 210 ntBASIC4.93□□□□□ -1.62
SYNPOQ8N3V7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms