Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AP004247.3-201ENST00000608682 624 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 AC092954.2-201ENST00000609103 430 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 Y_RNA.804-201ENST00000615262 101 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SYNE4Q8N205 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SYNE4Q8N205 AC074140.1-201ENST00000621617 208 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 DUXAP9-208ENST00000622815 614 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 AC004009.2-201ENST00000623016 728 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.96□□□□□ -1.62
SYNE4Q8N205 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SYNE4Q8N205 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.96□□□□□ -1.62
SYNE4Q8N205 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SYNE4Q8N205 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SYNE4Q8N205 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SYNE4Q8N205 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC119744.1-201ENST00000454746 1715 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 OR52E6-202ENST00000379946 954 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 MIR218-2-201ENST00000385006 110 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 Y_RNA.582-201ENST00000391023 95 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AL139247.1-201ENST00000422768 325 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 RPL31P54-201ENST00000429803 370 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 PRDX3P3-201ENST00000447765 522 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 RN7SKP283-201ENST00000517197 270 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC008802.1-201ENST00000519121 791 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 OR5AK1P-201ENST00000524837 922 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AP002748.2-201ENST00000528671 348 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC107016.1-201ENST00000550463 337 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 ZNF519P2-201ENST00000557032 169 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 MIR3913-1-201ENST00000577744 102 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 MIR3936-201ENST00000584304 110 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC244505.7-201ENST00000599675 272 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC006338.1-201ENST00000618453 749 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 AC015967.1-201ENST00000619893 476 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.95□□□□□ -1.62
SYNE4Q8N205 MIR3688-2-201ENST00000636963 87 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 MTCO1P23-201ENST00000415223 1526 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 AL354685.2-201ENST00000448218 1447 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SYNE4Q8N205 LINC00561-201ENST00000565815 2738 ntBASIC4.95□□□□□ -1.62
SYNE4Q8N205 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 Z95327.2-201ENST00000414579 1873 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNE4Q8N205 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.94□□□□□ -1.62
SYNE4Q8N205 RNU5F-6P-201ENST00000362979 116 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 RNU6-839P-201ENST00000363347 108 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 U1.1-201ENST00000384101 164 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 RNU6-114P-201ENST00000384704 105 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 RPL21P17-201ENST00000397467 475 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 HMGN2P31-201ENST00000432430 273 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 CYCSP43-201ENST00000438233 310 ntBASIC4.94□□□□□ -1.62
SYNE4Q8N205 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms