Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MIR5684-201ENST00000585074 65 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 BBIP1P1-201ENST00000602999 279 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC112187.2-201ENST00000604345 283 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AL022161.1-201ENST00000604390 213 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC090186.1-201ENST00000605991 572 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC012360.2-201ENST00000609349 391 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 MIR6500-201ENST00000622700 86 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 FAM91A3P-201ENST00000456826 2544 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 MTND4P16-201ENST00000466108 1367 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC018555.1-201ENST00000567548 1980 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 SNORA60-201ENST00000362396 134 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RNU6-289P-201ENST00000364093 107 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 MORF4L1P6-201ENST00000418771 268 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL590233.1-201ENST00000430017 456 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RPL23AP89-201ENST00000439324 255 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 BX322784.1-201ENST00000455793 1077 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RPS20P24-201ENST00000457473 361 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RPL36AP13-201ENST00000457490 317 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC104563.1-201ENST00000476147 376 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RN7SL132P-201ENST00000478131 296 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC082651.2-201ENST00000496833 166 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC021678.1-201ENST00000505195 936 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 TMEM248P1-201ENST00000510579 951 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC010625.1-201ENST00000511296 403 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 OR5AP1P-201ENST00000529730 940 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AP004247.1-201ENST00000531556 1289 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RPL23AP87-202ENST00000573039 466 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AC006130.2-201ENST00000586202 326 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL451044.1-201ENST00000604867 238 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL158063.1-201ENST00000615349 536 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL356489.2-201ENST00000566968 3528 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 ZNF962P-201ENST00000443465 3140 ntBASIC3.76□□□□□ -1.81
BEST3Q8N1M1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.76□□□□□ -1.81
BEST3Q8N1M1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 RNU6-28P-201ENST00000362378 107 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 RNU4-21P-201ENST00000362802 126 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 HSPD1P16-201ENST00000402302 394 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AL355379.1-201ENST00000405542 640 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 MIR1305-201ENST00000408300 86 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 RN7SKP202-201ENST00000410439 330 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 MTCYBP24-201ENST00000420387 1106 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AL365184.2-201ENST00000431139 435 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 CKS1BP5-201ENST00000434172 273 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.75□□□□□ -1.81
BEST3Q8N1M1 LARP1BP3-201ENST00000437229 869 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 LSM1P1-201ENST00000438629 273 ntBASIC3.75□□□□□ -1.81
BEST3Q8N1M1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms