Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNA5SP111-201ENST00000411386 101 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX5Q8N196 ATG3P1-201ENST00000419507 911 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AL133173.1-201ENST00000423458 397 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 RPS26P47-201ENST00000427219 348 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 DYNLL1P5-201ENST00000467158 270 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC087385.1-201ENST00000475062 312 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 RPL32P33-201ENST00000487023 394 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC009120.1-201ENST00000493458 473 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AP002812.1-201ENST00000495378 474 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC097473.1-201ENST00000508142 408 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 RNU6-764P-201ENST00000516396 105 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 RNU6-685P-201ENST00000517088 95 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AC023442.1-201ENST00000531247 422 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AC008521.1-201ENST00000587471 187 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AC020910.3-201ENST00000603701 874 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC009570.1-201ENST00000609599 745 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AL049539.1-201ENST00000611964 459 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC011890.2-201ENST00000613393 294 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AC027287.1-201ENST00000553115 1453 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SIX5Q8N196 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SIX5Q8N196 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.94□□□□□ -1.46
SIX5Q8N196 AC144833.1-201ENST00000567953 4089 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX5Q8N196 ZNF807-201ENST00000328088 1707 ntBASIC5.94□□□□□ -1.46
SIX5Q8N196 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 Y_RNA.5-201ENST00000362334 102 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 SNORD3E-201ENST00000362899 217 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 RN7SKP103-201ENST00000363848 320 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 RNU6-1318P-201ENST00000365389 103 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 Y_RNA.364-201ENST00000365532 101 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 SNORA56-201ENST00000383966 129 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 MIR568-201ENST00000385036 95 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 MIR765-201ENST00000390226 114 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 SNORD70.1-201ENST00000391007 85 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 E2F6P2-201ENST00000420708 748 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX5Q8N196 PSMA2P3-201ENST00000429685 675 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX5Q8N196 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX5Q8N196 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 CEACAMP7-201ENST00000444105 496 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 DHFRP3-201ENST00000455595 559 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX5Q8N196 RN7SL352P-201ENST00000466002 277 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 MTATP8P1-201ENST00000467115 207 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 RN7SL222P-201ENST00000476452 299 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX5Q8N196 RN7SKP66-201ENST00000516681 231 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 RNU1-54P-201ENST00000517181 120 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 AC021678.3-201ENST00000517893 476 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 IGKV2D-36-201ENST00000518643 226 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX5Q8N196 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.93□□□□□ -1.46
SIX5Q8N196 AL158032.1-201ENST00000605401 106 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 AL122125.1-201ENST00000616999 600 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 PLCE1P1-201ENST00000622094 305 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
SIX5Q8N196 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SIX5Q8N196 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
SIX5Q8N196 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
SIX5Q8N196 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX5Q8N196 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
SIX5Q8N196 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX5Q8N196 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX5Q8N196 AC023421.1-201ENST00000590535 1785 ntBASIC5.93□□□□□ -1.46
SIX5Q8N196 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX5Q8N196 AC110373.1-201ENST00000505994 3505 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms