Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC093671.1-201ENST00000624981 2929 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 Y_RNA.83-201ENST00000363005 113 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 RNA5SP346-201ENST00000363541 121 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 SNORD50B-201ENST00000364995 70 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 Y_RNA.480-201ENST00000384364 102 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 RNU11-4P-201ENST00000391149 133 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 HMGA1P8-201ENST00000414130 321 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AL353662.1-201ENST00000439099 327 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 HMGN1P2-201ENST00000445197 310 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC008264.1-201ENST00000447612 367 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC010631.1-201ENST00000474150 156 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 HMGN1P16-201ENST00000508308 283 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 ACA59.1-201ENST00000515966 143 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 SNORA25.14-201ENST00000516481 132 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 RNU6-911P-201ENST00000516523 104 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 ERHP1-201ENST00000523006 310 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 RPSAP75-201ENST00000605848 301 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 TUG1_2.1-201ENST00000614234 87 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC010325.3-201ENST00000641084 394 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 AC016745.2-201ENST00000608834 3443 ntBASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AL662795.2-201ENST00000624252 3706 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC024587.1-201ENST00000505925 2157 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RNVU1-3-201ENST00000364313 161 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 SNORD51-201ENST00000384320 80 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RNU6-1081P-201ENST00000384537 107 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 SNORD73A-201ENST00000386062 65 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RNU4-65P-201ENST00000410473 140 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AL030996.1-201ENST00000411430 235 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC096921.1-201ENST00000411661 375 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RPS23P10-201ENST00000416185 486 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 GNG5P5-201ENST00000420444 220 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 EIF4EP2-201ENST00000422816 654 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RPL12P18-201ENST00000437175 325 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC097359.1-201ENST00000447946 463 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC112187.1-201ENST00000455837 479 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RN7SL72P-201ENST00000460697 269 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RN7SL717P-201ENST00000478343 297 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RPL31P60-201ENST00000478450 367 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 NDUFB4P9-201ENST00000511646 388 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 SNORA70.11-201ENST00000515987 138 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 SNORA70.13-201ENST00000516116 138 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC069113.1-201ENST00000517763 267 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC090151.1-201ENST00000520784 730 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC174048.1-201ENST00000603389 144 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RNU6-85P-201ENST00000605989 107 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC073869.10-201ENST00000642016 354 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 HSPA8P1-201ENST00000425843 1833 ntBASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC116Q8IYX3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms