| ATG9A | Q7Z3C6 | ARL2BPP5-201 | ENST00000523141 | 481 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AP001360.2-201 | ENST00000534423 | 562 nt | TSL 4 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | UBE2NP1-201 | ENST00000545592 | 458 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC009396.3-201 | ENST00000555680 | 354 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | GTF2IP8-201 | ENST00000560687 | 584 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | LINC01899-203 | ENST00000584810 | 337 nt | TSL 2 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | MIR4276-201 | ENST00000584832 | 70 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC002546.2-201 | ENST00000585537 | 584 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC090771.2-201 | ENST00000588794 | 571 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC092296.3-201 | ENST00000589968 | 249 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC008751.2-201 | ENST00000597885 | 980 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL360267.1-201 | ENST00000607309 | 666 nt | TSL 4 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | IL33-205 | ENST00000611532 | 757 nt | TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | Xist_exon1.1-201 | ENST00000618930 | 85 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL354696.2-202 | ENST00000620300 | 613 nt | TSL 2 BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AP003485.2-201 | ENST00000623636 | 610 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | CNGB3-201 | ENST00000320005 | 4347 nt | APPRIS P1 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | CR383658.2-201 | ENST00000547576 | 1525 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNF111-206 | ENST00000559209 | 5278 nt | TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | PTPN22-207 | ENST00000528414 | 3424 nt | TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | ZRANB2-201 | ENST00000254821 | 2821 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | CENPF-201 | ENST00000366955 | 10307 nt | APPRIS P1 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RGPD1-202 | ENST00000409776 | 6692 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU1-70P-201 | ENST00000362618 | 164 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU6-582P-201 | ENST00000362989 | 107 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU6-444P-201 | ENST00000383988 | 108 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU6-83P-201 | ENST00000384568 | 112 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | MIR483-201 | ENST00000385070 | 76 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC009505.1-201 | ENST00000413151 | 424 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC063979.1-201 | ENST00000415539 | 377 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC008280.1-201 | ENST00000418851 | 412 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC245052.1-201 | ENST00000426213 | 410 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AP000695.2-201 | ENST00000428667 | 715 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL008629.1-201 | ENST00000438615 | 184 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC093155.1-201 | ENST00000440164 | 826 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC004160.1-211 | ENST00000445839 | 565 nt | TSL 4 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC005008.2-202 | ENST00000447776 | 439 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC115115.1-201 | ENST00000449927 | 248 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC099566.1-212 | ENST00000451675 | 799 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC097262.1-201 | ENST00000452559 | 548 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | NDUFA5P7-201 | ENST00000452914 | 242 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL160287.1-201 | ENST00000455612 | 432 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC026355.2-201 | ENST00000456755 | 723 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RPL9P32-201 | ENST00000464118 | 620 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC091212.1-201 | ENST00000474798 | 395 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RPL21P103-201 | ENST00000479921 | 488 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | LINC01327-201 | ENST00000498413 | 535 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC114912.1-201 | ENST00000503394 | 546 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC091951.3-201 | ENST00000504093 | 246 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | DSTNP2-201 | ENST00000504533 | 515 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | LINC02118-201 | ENST00000505899 | 407 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC093297.1-201 | ENST00000511712 | 591 nt | TSL 4 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | MTCO1P30-201 | ENST00000515244 | 580 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU6-1225P-201 | ENST00000516336 | 65 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC109466.1-214 | ENST00000522762 | 583 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AP002812.3-201 | ENST00000527012 | 551 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AP003461.1-201 | ENST00000528866 | 78 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | CLEC7A-212 | ENST00000533022 | 625 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC002400.1-201 | ENST00000569310 | 726 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | LINC00649-204 | ENST00000593977 | 640 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC104534.1-201 | ENST00000594558 | 566 nt | TSL 4 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | CKS1BP3-201 | ENST00000600888 | 237 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC110741.2-201 | ENST00000605278 | 268 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL451074.6-201 | ENST00000608512 | 729 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC012531.5-201 | ENST00000611375 | 151 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC005332.6-201 | ENST00000613178 | 446 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC092142.2-201 | ENST00000614642 | 354 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC120349.3-201 | ENST00000624377 | 529 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC019226.2-201 | ENST00000625973 | 424 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC026634.1-201 | ENST00000634369 | 198 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | DDX60L-209 | ENST00000511577 | 6781 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | ZNF404-201 | ENST00000324394 | 1844 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | XIRP2-204 | ENST00000409273 | 12269 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | SLC10A5P1-201 | ENST00000379063 | 1306 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | LRRC49-222 | ENST00000560158 | 1898 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | R3HDM1-220 | ENST00000628915 | 4325 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | TUBD1-214 | ENST00000592426 | 1460 nt | APPRIS P1 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | Z83843.1-201 | ENST00000604070 | 3685 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU6-492P-201 | ENST00000363035 | 104 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RNU6-525P-201 | ENST00000363685 | 104 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | SUGT1P1-201 | ENST00000379514 | 476 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | IGLV5-37-201 | ENST00000390300 | 374 nt | APPRIS P1 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL139421.1-201 | ENST00000423010 | 169 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | Z97206.2-201 | ENST00000423489 | 589 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RPL7P34-201 | ENST00000433316 | 712 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC008568.1-203 | ENST00000433406 | 765 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AL445259.1-202 | ENST00000434768 | 379 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC026167.1-201 | ENST00000435651 | 299 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | C4orf26-202 | ENST00000435974 | 560 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC241584.1-201 | ENST00000438469 | 1241 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RPL23AP76-201 | ENST00000441860 | 458 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC010975.1-201 | ENST00000443301 | 669 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RPS26P56-201 | ENST00000444468 | 240 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | RPL21P134-201 | ENST00000453468 | 483 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | NECAP1P2-201 | ENST00000455668 | 727 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AP001086.1-201 | ENST00000494882 | 321 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC108935.1-201 | ENST00000504874 | 518 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC079380.1-201 | ENST00000507844 | 619 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC112178.1-201 | ENST00000511165 | 676 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| ATG9A | Q7Z3C6 | AC116353.3-201 | ENST00000511215 | 249 nt | BASIC | 4.12 | □□□□□ -1.75 | | |