Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC091304.9-201ENST00000612091 226 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC073534.2-201ENST00000620377 381 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 AC012150.2-201ENST00000621300 544 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 OR5BE1P-202ENST00000641168 1176 ntBASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC144BQ3MJ40 NOL8P1-201ENST00000508336 3529 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RAD17P1-201ENST00000418130 2042 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 OR52B1P-201ENST00000316506 909 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 U8.3-201ENST00000363321 132 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 CCNG1P1-201ENST00000406783 885 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RPL7P57-201ENST00000423238 740 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL451139.1-201ENST00000434718 346 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RAC1P7-201ENST00000445367 377 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC010655.1-201ENST00000449336 292 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC108059.3-201ENST00000456388 214 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RPL5P30-201ENST00000465511 891 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC105252.1-201ENST00000503089 286 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RPL37P25-201ENST00000507308 276 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RN7SKP21-201ENST00000516503 220 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 RPL21P7-201ENST00000557463 483 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 COX6CP3-201ENST00000580869 223 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 KC877982.1-201ENST00000602313 470 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC245014.2-201ENST00000603689 287 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC233280.2-201ENST00000603917 1070 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL022154.1-201ENST00000604698 785 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AC246785.4-201ENST00000605374 287 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 HMGN2P28-201ENST00000606102 262 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL158211.4-201ENST00000606988 584 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 AL445487.1-201ENST00000415694 1580 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC144BQ3MJ40 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 LINC01355-201ENST00000566551 5444 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 Y_RNA.6-201ENST00000362350 114 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 RN7SKP227-201ENST00000364445 330 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 RPL23AP32-201ENST00000395315 459 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 HSPD1P16-201ENST00000402302 394 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 RNA5SP146-201ENST00000410743 123 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 ELOCP17-201ENST00000414751 326 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AL589872.1-201ENST00000426602 288 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 OR2B8P-201ENST00000432841 938 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 MTND1P1-201ENST00000445453 368 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC010618.1-201ENST00000469924 477 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC022795.1-201ENST00000473808 480 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC107401.1-201ENST00000503426 685 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 KCTD9P5-201ENST00000504141 1170 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AP003181.2-201ENST00000528941 181 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC126177.3-201ENST00000551839 688 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC015912.2-201ENST00000571053 181 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 MIR3146-201ENST00000580367 79 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC023575.1-201ENST00000580510 358 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC025165.5-201ENST00000602802 578 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms