Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RPL21P103-201ENST00000479921 488 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC106707.2-201ENST00000484182 374 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC069499.1-201ENST00000489433 509 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC010486.3-201ENST00000511602 785 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC005798.1-201ENST00000513715 387 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 RN7SKP18-201ENST00000516005 275 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 MTCO1P47-201ENST00000523889 1271 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC090888.1-201ENST00000561335 1141 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 MIR4637-201ENST00000582405 84 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 MAGOH2P-202ENST00000584384 429 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AL513477.2-201ENST00000607858 568 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC079228.1-201ENST00000624774 1049 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 AC007671.2-201ENST00000637344 619 ntBASIC4.05□□□□□ -1.76
USP41Q3LFD5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP41Q3LFD5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.05□□□□□ -1.76
USP41Q3LFD5 AP002907.1-201ENST00000606361 1430 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AL079343.1-201ENST00000572358 1771 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP41Q3LFD5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP41Q3LFD5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 RNVU1-3-201ENST00000364313 161 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 Y_RNA.333-201ENST00000365274 102 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 SNORD116-2-201ENST00000384274 95 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 SNORA70E-201ENST00000384492 135 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 SNORD116-6-201ENST00000384711 96 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 MIR153-1-201ENST00000384914 90 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 MTCYBP38-201ENST00000417160 1123 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 RPS12P23-201ENST00000419579 400 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 MTND4P6-201ENST00000438297 472 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 MTCO3P11-201ENST00000455103 774 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 UBDP1-202ENST00000457888 382 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC108941.1-201ENST00000502853 530 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC093767.1-201ENST00000504523 156 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC104619.4-201ENST00000510773 249 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 MTCYBP43-201ENST00000513621 740 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 HIGD1AP3-201ENST00000515857 278 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 RNU6-150P-201ENST00000516237 95 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 RNU6-759P-201ENST00000516740 103 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC087373.1-201ENST00000524920 491 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 DEFB131D-201ENST00000526803 184 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP41Q3LFD5 CYCSP2-201ENST00000558168 301 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 U3.45-201ENST00000607547 219 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC048344.4-201ENST00000619744 527 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC015967.1-201ENST00000619893 476 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 AC079248.2-201ENST00000623779 326 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.04□□□□□ -1.76
USP41Q3LFD5 AL136964.1-201ENST00000622038 2990 ntBASIC4.04□□□□□ -1.76
USP41Q3LFD5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
USP41Q3LFD5 RNU6-374P-201ENST00000364146 108 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 AL121972.1-201ENST00000402023 252 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.03□□□□□ -1.76
USP41Q3LFD5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP41Q3LFD5 RPL31P2-201ENST00000413849 377 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 AC009518.2-201ENST00000418056 731 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 RPL31P45-201ENST00000419532 356 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 AL953862.1-201ENST00000423016 168 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 KCTD9P3-201ENST00000434597 1169 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 RPS17P13-201ENST00000448974 407 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 MTCO3P16-201ENST00000454456 754 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 AC097493.1-201ENST00000463958 372 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.03□□□□□ -1.76
USP41Q3LFD5 RPL7P24-201ENST00000493052 752 ntBASIC4.03□□□□□ -1.76
USP41Q3LFD5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms