Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNA5SP456-201ENST00000364002 114 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 MIR27B-201ENST00000385129 97 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 AL162578.1-201ENST00000406202 378 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 RPS4XP7-201ENST00000406274 780 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 RPL23AP47-201ENST00000408017 460 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 USP9YP20-201ENST00000419224 558 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 MTND2P16-201ENST00000419987 799 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 FCF1P1-201ENST00000432690 571 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 RPS27AP9-201ENST00000477681 438 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 RN7SKP282-201ENST00000516824 299 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 AC022079.2-201ENST00000619739 566 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 AC145207.9-201ENST00000623802 325 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.04□□□□□ -1.92
RFX7Q2KHR2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RFX7Q2KHR2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX7Q2KHR2 XKRYP4-201ENST00000414395 483 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.03□□□□□ -1.92
RFX7Q2KHR2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
RFX7Q2KHR2 XKRYP5-201ENST00000449659 483 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 RN7SKP24-201ENST00000515888 284 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 AC034268.2-201ENST00000571784 482 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.03□□□□□ -1.92
RFX7Q2KHR2 MAGOH2P-202ENST00000584384 429 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 DNAJC19P3-201ENST00000594491 331 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 AC064859.1-201ENST00000624741 174 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFX7Q2KHR2 API5P2-201ENST00000397055 1498 ntBASIC3.03□□□□□ -1.92
RFX7Q2KHR2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RFX7Q2KHR2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 SAR1AP4-201ENST00000429225 591 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 RPL21P104-201ENST00000464143 478 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC133134.1-201ENST00000466800 359 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 UBL5P3-201ENST00000475112 231 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 RPL36AP51-201ENST00000487216 318 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AL391156.1-201ENST00000554965 554 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC022069.1-201ENST00000582910 658 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 MIR4769-201ENST00000584126 77 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC010620.2-201ENST00000600135 313 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 GMCL1P2-201ENST00000605230 823 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC103810.6-201ENST00000606708 136 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC006023.2-201ENST00000609916 167 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC121761.2-201ENST00000617300 689 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 AC087565.3-202ENST00000642085 1603 ntBASIC3.02□□□□□ -1.93
RFX7Q2KHR2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RFX7Q2KHR2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 SNORA36C-201ENST00000384289 132 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 SEPT7P2-202ENST00000398921 823 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC105402.1-201ENST00000413336 545 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 YWHAZP7-201ENST00000436906 631 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC069277.2-201ENST00000454211 432 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 snoU13.26-201ENST00000459452 105 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 RN7SKP283-201ENST00000517197 270 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 SNORA31.26-201ENST00000517250 137 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 HMGB1P41-201ENST00000520234 440 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AC128657.1-201ENST00000549459 145 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 SNORD53-201ENST00000579969 78 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 ZNF658B-202ENST00000615961 3375 ntBASIC3.01□□□□□ -1.93
RFX7Q2KHR2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
RFX7Q2KHR2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3□□□□□ -1.93
RFX7Q2KHR2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3□□□□□ -1.93
RFX7Q2KHR2 AL513477.1-202ENST00000417061 214 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms