Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNORA41-201ENST00000384675 132 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 RNA5SP105-201ENST00000391123 113 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 MIR1193-201ENST00000408109 78 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 MIR1298-201ENST00000408783 112 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 MED13P1-201ENST00000428342 171 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 CHEK2P4-201ENST00000450340 246 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 RNU1-88P-201ENST00000459274 128 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 OR7H2P-201ENST00000513483 306 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 EIF3KP3-201ENST00000514461 639 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 RNU6-189P-201ENST00000516120 101 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AP002392.1-201ENST00000537692 208 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 SETP2-201ENST00000553886 926 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 NPM1P42-201ENST00000560329 862 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC090517.1-201ENST00000569307 266 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC005899.2-201ENST00000584353 90 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC103705.1-201ENST00000619013 241 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 HSPD1P8-201ENST00000400121 1658 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 MFSD8-219ENST00000641228 2559 ntBASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RSPO4Q2I0M5 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AL359893.1-201ENST00000447628 1580 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC090220.1-201ENST00000593078 1699 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 Y_RNA.2-201ENST00000362330 96 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 Y_RNA.83-201ENST00000363005 113 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 RNU5A-8P-201ENST00000364102 114 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 RNA5SP91-201ENST00000390902 119 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AP003170.5-201ENST00000397185 335 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 GLULP6-201ENST00000399502 913 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 HMGB3P7-201ENST00000400214 611 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AL133388.1-201ENST00000404509 287 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 RNU6-272P-201ENST00000411028 104 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 RPS17P17-201ENST00000419392 409 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 USP9YP30-201ENST00000430729 455 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 SNORD5.1-201ENST00000458800 75 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC009127.1-201ENST00000467090 155 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 RNU6-397P-201ENST00000516226 104 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 RNU6-313P-201ENST00000516317 112 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 SUB1P3-201ENST00000564581 315 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 FAM106CP-201ENST00000582212 507 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AL031320.1-201ENST00000604177 357 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AP001282.2-201ENST00000616149 309 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 uc_338.12-201ENST00000616344 181 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 THAP12P9-201ENST00000503971 2360 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 ZNF72P-201ENST00000425869 1908 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 AC018809.2-201ENST00000602436 3823 ntBASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RSPO4Q2I0M5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC005261.2-201ENST00000593427 4258 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms