| NDUFA9 | Q16795 | TUG1-202 | ENST00000521091 | 2110 nt | TSL 1 (best) BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | TRAPPC13-208 | ENST00000505553 | 1410 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SYNE1-212 | ENST00000423061 | 27436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | MAPK6PS3-201 | ENST00000403865 | 2162 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNF6-201 | ENST00000346166 | 3282 nt | APPRIS P1 TSL 1 (best) BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | OR8K5-201 | ENST00000313447 | 924 nt | APPRIS P1 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | GSTA1-201 | ENST00000334575 | 1019 nt | APPRIS P1 TSL 1 (best) BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | OR2M2-201 | ENST00000359682 | 1044 nt | APPRIS P1 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-989P-201 | ENST00000362756 | 107 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNA5SP383-201 | ENST00000362934 | 120 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RFX3-203 | ENST00000381984 | 364 nt | TSL 3 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-730P-201 | ENST00000383954 | 104 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-224P-201 | ENST00000384055 | 107 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-1300P-201 | ENST00000391046 | 108 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | MTND4LP20-201 | ENST00000402379 | 270 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RPS3AP25-201 | ENST00000411660 | 793 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RPS7P13-201 | ENST00000413955 | 498 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC017079.2-201 | ENST00000416102 | 485 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL691426.1-201 | ENST00000416507 | 509 nt | TSL 2 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC007161.1-201 | ENST00000418534 | 1061 nt | TSL 3 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | TOMM22P1-201 | ENST00000418578 | 312 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC245291.1-201 | ENST00000419501 | 328 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | FNDC3CP-201 | ENST00000420795 | 1155 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | MTCO1P3-201 | ENST00000429327 | 192 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SPINK8-201 | ENST00000434006 | 444 nt | APPRIS P1 TSL 3 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RPL21P112-201 | ENST00000434403 | 463 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC093155.1-201 | ENST00000440164 | 826 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | HMGN1P18-201 | ENST00000457642 | 277 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | FAIM-205 | ENST00000464668 | 641 nt | APPRIS P3 TSL 5 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RN7SL601P-201 | ENST00000471221 | 293 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | VPS26AP1-201 | ENST00000483197 | 979 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | TXNP6-201 | ENST00000510190 | 310 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC074250.1-201 | ENST00000511117 | 192 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-276P-201 | ENST00000516114 | 96 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC010376.1-201 | ENST00000522101 | 334 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC087362.1-201 | ENST00000527912 | 434 nt | TSL 5 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AP003385.6-201 | ENST00000531603 | 374 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | CD69-203 | ENST00000536709 | 1020 nt | TSL 2 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC087242.1-201 | ENST00000536931 | 572 nt | TSL 4 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC092120.1-201 | ENST00000562211 | 420 nt | TSL 3 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SULT1C2P1-202 | ENST00000562418 | 459 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | LINC01894-201 | ENST00000580984 | 487 nt | TSL 2 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AP005230.1-201 | ENST00000585072 | 675 nt | TSL 5 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | BNIP3P27-201 | ENST00000599991 | 412 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SRGNP1-201 | ENST00000603392 | 451 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC112220.2-201 | ENST00000605513 | 533 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | 5S_rRNA.12-201 | ENST00000617631 | 107 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL354696.2-202 | ENST00000620300 | 613 nt | TSL 2 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | TTN-AS1-267 | ENST00000628826 | 662 nt | TSL 5 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC099654.8-201 | ENST00000637757 | 681 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SYNE2-212 | ENST00000554584 | 20508 nt | TSL 5 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL356274.2-201 | ENST00000624379 | 3752 nt | BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | LIG4-205 | ENST00000614526 | 3884 nt | TSL 2 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | TFEC-203 | ENST00000393485 | 2704 nt | TSL 2 BASIC | 3.2 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | UFM1-201 | ENST00000239878 | 3138 nt | APPRIS P1 TSL 1 (best) BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SLC25A46-208 | ENST00000513807 | 1546 nt | TSL 2 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | MBNL3-204 | ENST00000370853 | 2661 nt | APPRIS P4 TSL 1 (best) BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | ZNF280D-201 | ENST00000267807 | 4328 nt | APPRIS P3 TSL 1 (best) BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | ZNF826P-207 | ENST00000622273 | 1910 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | CENPJ-205 | ENST00000545981 | 4299 nt | TSL 2 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | ZNF679-201 | ENST00000255746 | 1297 nt | APPRIS P1 TSL 1 (best) BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | OR4P4-201 | ENST00000314612 | 939 nt | APPRIS P1 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SNORD46.1-201 | ENST00000364139 | 104 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-335P-201 | ENST00000364563 | 113 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-629P-201 | ENST00000384061 | 103 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RNU6-761P-201 | ENST00000384148 | 107 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL138880.1-201 | ENST00000405824 | 642 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL583834.1-201 | ENST00000406943 | 343 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | DPRXP1-201 | ENST00000426312 | 460 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SEPT7P5-201 | ENST00000434048 | 306 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC127537.2-201 | ENST00000439258 | 465 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL360013.2-201 | ENST00000440104 | 807 nt | TSL 2 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | LINC00278-202 | ENST00000444263 | 587 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC098484.1-201 | ENST00000447572 | 484 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC079776.3-201 | ENST00000450665 | 370 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC010890.1-201 | ENST00000454699 | 469 nt | TSL 4 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC026355.2-201 | ENST00000456755 | 723 nt | TSL 2 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC012081.1-201 | ENST00000462382 | 477 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | PABPC1P3-201 | ENST00000469174 | 459 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RN7SL442P-201 | ENST00000473804 | 320 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RPL31P13-201 | ENST00000484151 | 370 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC108078.3-201 | ENST00000502633 | 489 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC110794.1-201 | ENST00000505816 | 425 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | LINC02118-201 | ENST00000505899 | 407 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC093535.1-201 | ENST00000515808 | 747 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | RN7SKP289-201 | ENST00000517244 | 295 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC093331.1-201 | ENST00000521474 | 169 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | MTCYBP41-201 | ENST00000528913 | 1123 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | LRRC6P1-201 | ENST00000532188 | 885 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | SOX5-AS1-201 | ENST00000539583 | 573 nt | TSL 4 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | GLYCAM1-202 | ENST00000546607 | 553 nt | TSL 1 (best) BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | LINC01405-202 | ENST00000547607 | 674 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC090502.2-201 | ENST00000549267 | 280 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC090680.2-201 | ENST00000550279 | 742 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | MTCYBP27-201 | ENST00000555160 | 670 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | PWRN1-202 | ENST00000562501 | 642 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AL032819.1-201 | ENST00000568554 | 379 nt | TSL 3 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | ALDH3A2-208 | ENST00000571163 | 590 nt | TSL 5 BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | CCDC58P3-201 | ENST00000590792 | 430 nt | BASIC | 3.19 | □□□□□ -1.9 | | |
| NDUFA9 | Q16795 | AC096947.1-201 | ENST00000603233 | 470 nt | BASIC | 3.19 | □□□□□ -1.9 | | |