Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 NDUFA5P10-201ENST00000432147 357 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 HSFY3P-201ENST00000444242 1191 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC104978.1-201ENST00000449387 391 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 BX510359.1-201ENST00000456973 237 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC008716.1-201ENST00000511084 513 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 RNA5SP367-201ENST00000516557 118 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AL121594.4-201ENST00000556211 1196 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 H3F3AP1-201ENST00000559984 334 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC107954.1-201ENST00000565906 727 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC009163.5-201ENST00000575421 637 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC005412.1-201ENST00000580812 1049 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 MIR3605-201ENST00000583214 100 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 AC091953.5-201ENST00000622919 233 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 FRG1DP-201ENST00000635586 771 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 OR8B1P-202ENST00000641132 1178 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 ZNF519P1-201ENST00000449011 1626 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HIST1H1AQ02539 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HIST1H1AQ02539 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
HIST1H1AQ02539 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 MIR422A-201ENST00000362286 90 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 MIR23B-201ENST00000384832 97 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 MIR627-201ENST00000384979 97 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 SNORA11C-201ENST00000408532 129 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC096533.1-201ENST00000411645 353 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 RPL7P8-201ENST00000411964 730 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AL137014.1-201ENST00000420490 1226 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 DUTP6-201ENST00000425573 462 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 RPS20P5-201ENST00000434808 360 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC023512.1-201ENST00000444513 499 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AL358232.1-201ENST00000448030 501 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 CDC42P4-201ENST00000510507 563 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 SCARNA13-201ENST00000516672 275 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 PSMA2P1-201ENST00000526365 646 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 HPRT1P3-201ENST00000539521 576 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AL391156.1-201ENST00000554965 554 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 GLUD1P4-201ENST00000590914 418 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 FAM60CP-201ENST00000591086 664 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC060766.3-201ENST00000591442 263 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 ZNF92P3-201ENST00000596594 954 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC006539.2-201ENST00000601729 572 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC069200.1-201ENST00000609511 323 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC009570.1-201ENST00000609599 745 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 U6.48-201ENST00000618523 106 ntBASIC2.15□□□□□ -2.07
HIST1H1AQ02539 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.15□□□□□ -2.07
HIST1H1AQ02539 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC090740.1-201ENST00000623193 2262 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 RNA5SP374-201ENST00000362939 125 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AL512633.1-201ENST00000399931 655 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 SFR1P1-201ENST00000403720 688 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AL138885.1-201ENST00000405921 675 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AL024507.1-201ENST00000412741 274 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AL512649.1-201ENST00000428997 581 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 HMGB1P48-201ENST00000446155 598 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 ST13P20-201ENST00000447996 1065 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 HMGB1P5-202ENST00000451497 985 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 NIPA2P5-201ENST00000452282 464 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.14□□□□□ -2.07
HIST1H1AQ02539 RPL30P14-201ENST00000482744 348 ntBASIC2.14□□□□□ -2.07
HIST1H1AQ02539 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms