Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 AC026523.2-201ENST00000625039 7739 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 RNU6-582P-201ENST00000362989 107 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 RPL23AP14-201ENST00000468281 468 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 CKS1BP7-201ENST00000522230 235 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 MTCYBP20-201ENST00000524239 1129 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 NPM1P35-201ENST00000533043 868 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 OR4H12P-201ENST00000556269 907 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC012182.1-201ENST00000570133 895 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 AC083760.1-201ENST00000589621 670 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.44□□□□□ -2.18
HSPG2P98160 LINC00216-201ENST00000623548 1126 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 AC084035.1-201ENST00000634543 607 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
HSPG2P98160 AC095050.2-201ENST00000510748 1458 ntBASIC1.44□□□□□ -2.18
HSPG2P98160 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 RNU6-457P-201ENST00000363999 107 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HSPG2P98160 AC004987.3-201ENST00000413879 771 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 RPS15AP6-201ENST00000420703 385 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC002553.2-201ENST00000453217 340 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC072039.1-201ENST00000477611 581 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.43□□□□□ -2.18
HSPG2P98160 AC100870.1-201ENST00000522035 505 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AL589994.2-201ENST00000621124 579 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC106730.3-201ENST00000624568 641 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 AC002543.1-201ENST00000299783 1954 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.43□□□□□ -2.18
HSPG2P98160 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 SNORD114-26-201ENST00000363543 72 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.43□□□□□ -2.18
HSPG2P98160 RPL23AP74-201ENST00000437246 471 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.43□□□□□ -2.18
HSPG2P98160 MIR3605-201ENST00000583214 100 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC093908.1-201ENST00000623125 8092 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 AC097714.1-201ENST00000511272 1647 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 RNA5SP325-201ENST00000363756 130 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 MIR583-201ENST00000384846 75 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.43□□□□□ -2.18
HSPG2P98160 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.43□□□□□ -2.18
HSPG2P98160 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 HSPE1P18-201ENST00000517602 280 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.43□□□□□ -2.18
HSPG2P98160 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.43□□□□□ -2.18
HSPG2P98160 VN1R80P-201ENST00000597126 338 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HSPG2P98160 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.43□□□□□ -2.18
HSPG2P98160 AL355379.1-201ENST00000405542 640 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 RNA5SP274-201ENST00000410484 108 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 POLR2J4-204ENST00000418424 324 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.43□□□□□ -2.18
HSPG2P98160 AL360085.1-201ENST00000604713 532 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 AL591516.1-201ENST00000611326 274 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 PVT1_3.1-201ENST00000620853 95 ntBASIC1.43□□□□□ -2.18
HSPG2P98160 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HSPG2P98160 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HSPG2P98160 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.42□□□□□ -2.18
HSPG2P98160 MIR613-201ENST00000385248 95 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HSPG2P98160 RPL7P54-201ENST00000438336 674 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 MRPL50P4-201ENST00000446432 475 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 RPL23AP45-201ENST00000476406 468 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 AC103975.1-201ENST00000482506 483 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 AC135721.1-201ENST00000497954 479 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 PDCL2P2-201ENST00000533651 189 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 AC123904.3-201ENST00000547218 814 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 RPL23AP84-201ENST00000571193 464 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 SNORA4-201ENST00000584302 138 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HSPG2P98160 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
HSPG2P98160 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HSPG2P98160 AL139156.1-201ENST00000412785 841 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.42□□□□□ -2.18
HSPG2P98160 AC135628.1-201ENST00000568867 534 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HSPG2P98160 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.42□□□□□ -2.18
HSPG2P98160 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HSPG2P98160 RNU6-392P-201ENST00000364926 101 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 RAC1P3-201ENST00000416129 580 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 AL606490.7-201ENST00000433136 191 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.42□□□□□ -2.18
HSPG2P98160 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.42□□□□□ -2.18
HSPG2P98160 FGF7P3-201ENST00000454645 303 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.42□□□□□ -2.18
HSPG2P98160 TXNP6-201ENST00000510190 310 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 snoZ278.1-201ENST00000517059 112 ntBASIC1.42□□□□□ -2.18
HSPG2P98160 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms