Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.54□□□□□ -2
H3F3AP84243 SAR1AP4-201ENST00000429225 591 ntBASIC2.54□□□□□ -2
H3F3AP84243 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.54□□□□□ -2
H3F3AP84243 SNRPEP4-201ENST00000435815 279 ntBASIC2.54□□□□□ -2
H3F3AP84243 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.54□□□□□ -2
H3F3AP84243 NIPA2P5-201ENST00000452282 464 ntBASIC2.54□□□□□ -2
H3F3AP84243 OR6K1P-201ENST00000456766 971 ntBASIC2.54□□□□□ -2
H3F3AP84243 AC080014.1-201ENST00000496877 1201 ntBASIC2.54□□□□□ -2
H3F3AP84243 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.54□□□□□ -2
H3F3AP84243 HIGD1AP13-201ENST00000509878 289 ntBASIC2.54□□□□□ -2
H3F3AP84243 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.54□□□□□ -2
H3F3AP84243 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.54□□□□□ -2
H3F3AP84243 AC010306.1-201ENST00000523223 1117 ntBASIC2.54□□□□□ -2
H3F3AP84243 CIR1P1-201ENST00000524055 1133 ntBASIC2.54□□□□□ -2
H3F3AP84243 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.54□□□□□ -2
H3F3AP84243 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.54□□□□□ -2
H3F3AP84243 SERPINE4P-201ENST00000554978 281 ntBASIC2.54□□□□□ -2
H3F3AP84243 AC135507.2-201ENST00000612443 309 ntBASIC2.54□□□□□ -2
H3F3AP84243 AC002076.2-201ENST00000617362 122 ntBASIC2.54□□□□□ -2
H3F3AP84243 AC022509.4-201ENST00000621404 572 ntBASIC2.54□□□□□ -2
H3F3AP84243 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.54□□□□□ -2
H3F3AP84243 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
H3F3AP84243 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
H3F3AP84243 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
H3F3AP84243 ZNF807-201ENST00000328088 1707 ntBASIC2.54□□□□□ -2
H3F3AP84243 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 MTND5P28-201ENST00000438005 1594 ntBASIC2.53□□□□□ -2
H3F3AP84243 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
H3F3AP84243 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
H3F3AP84243 SNORA14A-201ENST00000364773 135 ntBASIC2.53□□□□□ -2
H3F3AP84243 MIR483-201ENST00000385070 76 ntBASIC2.53□□□□□ -2
H3F3AP84243 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 AL645937.1-202ENST00000421799 937 ntBASIC2.53□□□□□ -2
H3F3AP84243 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.53□□□□□ -2
H3F3AP84243 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 Z85994.2-201ENST00000434327 452 ntBASIC2.53□□□□□ -2
H3F3AP84243 RPS20P5-201ENST00000434808 360 ntBASIC2.53□□□□□ -2
H3F3AP84243 YWHAZP8-201ENST00000436935 731 ntBASIC2.53□□□□□ -2
H3F3AP84243 RPL23AP58-201ENST00000440453 469 ntBASIC2.53□□□□□ -2
H3F3AP84243 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.53□□□□□ -2
H3F3AP84243 snoU13.3-201ENST00000459441 104 ntBASIC2.53□□□□□ -2
H3F3AP84243 SUMO1P1-201ENST00000497904 306 ntBASIC2.53□□□□□ -2
H3F3AP84243 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.53□□□□□ -2
H3F3AP84243 AC025459.1-201ENST00000504072 156 ntBASIC2.53□□□□□ -2
H3F3AP84243 AC111000.2-201ENST00000507775 550 ntBASIC2.53□□□□□ -2
H3F3AP84243 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.53□□□□□ -2
H3F3AP84243 HMGB1P47-201ENST00000511281 589 ntBASIC2.53□□□□□ -2
H3F3AP84243 SNORA31.1-201ENST00000515993 133 ntBASIC2.53□□□□□ -2
H3F3AP84243 RNU6-491P-201ENST00000516099 110 ntBASIC2.53□□□□□ -2
H3F3AP84243 SNORA31.5-201ENST00000516190 133 ntBASIC2.53□□□□□ -2
H3F3AP84243 RNA5SP76-201ENST00000516277 87 ntBASIC2.53□□□□□ -2
H3F3AP84243 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.53□□□□□ -2
H3F3AP84243 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.53□□□□□ -2
H3F3AP84243 CR383656.14-201ENST00000551951 406 ntBASIC2.53□□□□□ -2
H3F3AP84243 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.53□□□□□ -2
H3F3AP84243 AC083760.1-201ENST00000589621 670 ntBASIC2.53□□□□□ -2
H3F3AP84243 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.53□□□□□ -2
H3F3AP84243 VIS1.1-201ENST00000610517 203 ntBASIC2.53□□□□□ -2
H3F3AP84243 AL020991.1-201ENST00000612314 373 ntBASIC2.53□□□□□ -2
H3F3AP84243 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.53□□□□□ -2
H3F3AP84243 AC018755.4-201ENST00000619715 454 ntBASIC2.53□□□□□ -2
H3F3AP84243 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.53□□□□□ -2
H3F3AP84243 AC092593.1-201ENST00000515413 1815 ntBASIC2.53□□□□□ -2
H3F3AP84243 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.53□□□□□ -2
H3F3AP84243 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
H3F3AP84243 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
H3F3AP84243 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
H3F3AP84243 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
H3F3AP84243 MT-TC-201ENST00000387405 66 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
H3F3AP84243 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 AC096664.2-201ENST00000411843 406 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 RAD23BP2-201ENST00000416003 1207 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 SSXP9-201ENST00000417503 292 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 ATG3P1-201ENST00000419507 911 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 USP9YP36-201ENST00000424581 829 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 MUPP-201ENST00000438111 566 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 AL513043.1-201ENST00000439124 535 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 AC107083.1-201ENST00000439643 279 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 AP002345.1-201ENST00000456493 928 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.52□□□□□ -2.01
H3F3AP84243 SETP6-201ENST00000479329 568 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
H3F3AP84243 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.52□□□□□ -2.01
H3F3AP84243 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 HPRT1P3-201ENST00000539521 576 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.52□□□□□ -2.01
H3F3AP84243 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.52□□□□□ -2.01
H3F3AP84243 SETP2-201ENST00000553886 926 ntBASIC2.52□□□□□ -2.01
H3F3AP84243 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms