Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.71
NKX6-1P78426 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NKX6-1P78426 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NKX6-1P78426 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NKX6-1P78426 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 RNU4-1-201ENST00000363925 141 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 RNU4-12P-201ENST00000365233 139 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 RNY3P13-201ENST00000365542 102 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 Y_RNA.554-201ENST00000384672 102 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AL035079.1-201ENST00000405210 287 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AC007738.1-201ENST00000413892 348 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 RPS7P15-201ENST00000415804 584 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 MTND1P23-201ENST00000416931 372 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 MTCO2P11-201ENST00000431069 680 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AL139415.2-201ENST00000431968 163 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC091180.1-201ENST00000462104 372 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AC007537.2-201ENST00000472093 511 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 RPL35P6-201ENST00000490024 372 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AC079382.1-201ENST00000493346 557 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 RPL7P23-201ENST00000493874 747 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC010342.1-201ENST00000514047 877 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 RNA5SP337-201ENST00000517007 109 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AL133271.1-201ENST00000538229 291 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC126177.3-201ENST00000551839 688 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX6-1P78426 OR4T1P-201ENST00000554933 911 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 MIR3167-201ENST00000579623 85 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 SNORD84-203ENST00000584275 78 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 BNIP3P33-201ENST00000598912 569 ntBASIC4.33□□□□□ -1.72
NKX6-1P78426 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX6-1P78426 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NKX6-1P78426 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX6-1P78426 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX6-1P78426 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.32□□□□□ -1.72
NKX6-1P78426 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX6-1P78426 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NKX6-1P78426 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.32□□□□□ -1.72
NKX6-1P78426 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX6-1P78426 AC093536.2-201ENST00000565257 1406 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
NKX6-1P78426 MFSD8-216ENST00000641147 4009 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX6-1P78426 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NKX6-1P78426 RNU6-223P-201ENST00000362830 107 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 Y_RNA.372-201ENST00000365599 102 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 MIR298-201ENST00000401212 88 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AL583834.1-201ENST00000406943 343 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 U3.32-201ENST00000408116 212 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 RPL17P36-201ENST00000420302 549 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX6-1P78426 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 RPL18P10-201ENST00000425606 538 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX6-1P78426 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.32□□□□□ -1.72
NKX6-1P78426 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX6-1P78426 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX6-1P78426 Z99127.3-201ENST00000448158 395 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AL356981.1-201ENST00000454879 684 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AC023598.1-201ENST00000472521 361 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AC103987.1-201ENST00000473394 348 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 RPS3AP14-201ENST00000483907 780 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX6-1P78426 AC026979.1-201ENST00000492525 396 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 GAPDHP56-201ENST00000506031 988 ntBASIC4.32□□□□□ -1.72
NKX6-1P78426 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms