Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNA5SP356-201ENST00000515972 94 ntBASIC1.44□□□□□ -2.18
RPL39P62891 AC109329.2-201ENST00000519658 482 ntBASIC1.44□□□□□ -2.18
RPL39P62891 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL39P62891 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL39P62891 OR11H5P-201ENST00000554039 926 ntBASIC1.44□□□□□ -2.18
RPL39P62891 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL39P62891 AC009163.5-201ENST00000575421 637 ntBASIC1.44□□□□□ -2.18
RPL39P62891 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.44□□□□□ -2.18
RPL39P62891 AC012557.1-201ENST00000607115 611 ntBASIC1.44□□□□□ -2.18
RPL39P62891 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL39P62891 uc_338.20-201ENST00000621563 178 ntBASIC1.44□□□□□ -2.18
RPL39P62891 CU459211.1-201ENST00000635667 749 ntBASIC1.44□□□□□ -2.18
RPL39P62891 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL39P62891 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
RPL39P62891 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL39P62891 AL139811.1-201ENST00000424779 2299 ntBASIC1.43□□□□□ -2.18
RPL39P62891 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
RPL39P62891 SNORD56.5-201ENST00000364281 72 ntBASIC1.43□□□□□ -2.18
RPL39P62891 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL39P62891 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPL39P62891 HSPE1P1-201ENST00000421494 318 ntBASIC1.43□□□□□ -2.18
RPL39P62891 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL39P62891 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPL39P62891 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL39P62891 AC027124.2-201ENST00000428249 105 ntBASIC1.43□□□□□ -2.18
RPL39P62891 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL39P62891 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.43□□□□□ -2.18
RPL39P62891 RPS3AP14-201ENST00000483907 780 ntBASIC1.43□□□□□ -2.18
RPL39P62891 AC008565.1-201ENST00000509046 885 ntBASIC1.43□□□□□ -2.18
RPL39P62891 AC008413.1-201ENST00000511864 177 ntBASIC1.43□□□□□ -2.18
RPL39P62891 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL39P62891 AC108471.1-201ENST00000513977 287 ntBASIC1.43□□□□□ -2.18
RPL39P62891 snoU109.6-201ENST00000516831 118 ntBASIC1.43□□□□□ -2.18
RPL39P62891 DUX4L52-201ENST00000549363 777 ntBASIC1.43□□□□□ -2.18
RPL39P62891 NOP56P3-201ENST00000549457 385 ntBASIC1.43□□□□□ -2.18
RPL39P62891 ANP32BP3-201ENST00000559213 706 ntBASIC1.43□□□□□ -2.18
RPL39P62891 MIR5694-201ENST00000581190 76 ntBASIC1.43□□□□□ -2.18
RPL39P62891 MIR5194-201ENST00000582634 120 ntBASIC1.43□□□□□ -2.18
RPL39P62891 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.43□□□□□ -2.18
RPL39P62891 AL159169.2-201ENST00000610061 1269 ntBASIC1.43□□□□□ -2.18
RPL39P62891 AC006329.2-201ENST00000611491 394 ntBASIC1.43□□□□□ -2.18
RPL39P62891 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.43□□□□□ -2.18
RPL39P62891 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC1.43□□□□□ -2.18
RPL39P62891 DUXAP9-208ENST00000622815 614 ntBASIC1.43□□□□□ -2.18
RPL39P62891 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.43□□□□□ -2.18
RPL39P62891 CTSLP2-204ENST00000629029 392 ntBASIC1.43□□□□□ -2.18
RPL39P62891 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.43□□□□□ -2.18
RPL39P62891 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.43□□□□□ -2.18
RPL39P62891 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPL39P62891 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPL39P62891 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPL39P62891 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RPL39P62891 AC090740.1-201ENST00000623193 2262 ntBASIC1.42□□□□□ -2.18
RPL39P62891 MAPK10-266ENST00000641066 6555 ntBASIC1.42□□□□□ -2.18
RPL39P62891 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL39P62891 ATF1P1-201ENST00000406040 927 ntBASIC1.42□□□□□ -2.18
RPL39P62891 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL39P62891 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.42□□□□□ -2.18
RPL39P62891 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.42□□□□□ -2.18
RPL39P62891 CBWD4P-201ENST00000445695 655 ntBASIC1.42□□□□□ -2.18
RPL39P62891 RN7SL274P-201ENST00000492268 272 ntBASIC1.42□□□□□ -2.18
RPL39P62891 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL39P62891 CCNHP1-201ENST00000513311 678 ntBASIC1.42□□□□□ -2.18
RPL39P62891 SNORA70.24-201ENST00000517233 118 ntBASIC1.42□□□□□ -2.18
RPL39P62891 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.42□□□□□ -2.18
RPL39P62891 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL39P62891 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPL39P62891 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL39P62891 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL39P62891 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL39P62891 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL39P62891 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL39P62891 AL590099.1-201ENST00000615276 138 ntBASIC1.42□□□□□ -2.18
RPL39P62891 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.42□□□□□ -2.18
RPL39P62891 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL39P62891 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL39P62891 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.42□□□□□ -2.18
RPL39P62891 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPL39P62891 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.42□□□□□ -2.18
RPL39P62891 MTCO1P24-201ENST00000515438 1558 ntBASIC1.42□□□□□ -2.18
RPL39P62891 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
RPL39P62891 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
RPL39P62891 RNA5SP289-201ENST00000362332 137 ntBASIC1.41□□□□□ -2.18
RPL39P62891 RNU1-91P-201ENST00000364746 163 ntBASIC1.41□□□□□ -2.18
RPL39P62891 MIR23B-201ENST00000384832 97 ntBASIC1.41□□□□□ -2.18
RPL39P62891 SUMO2P12-201ENST00000405924 140 ntBASIC1.41□□□□□ -2.18
RPL39P62891 BTF3P7-201ENST00000407097 488 ntBASIC1.41□□□□□ -2.18
RPL39P62891 SNORA11.4-201ENST00000408823 129 ntBASIC1.41□□□□□ -2.18
RPL39P62891 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.41□□□□□ -2.18
RPL39P62891 Z82209.1-201ENST00000422141 2135 ntBASIC1.41□□□□□ -2.18
RPL39P62891 USP9YP36-201ENST00000424581 829 ntBASIC1.41□□□□□ -2.18
RPL39P62891 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL39P62891 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.41□□□□□ -2.18
RPL39P62891 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL39P62891 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
RPL39P62891 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL39P62891 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL39P62891 UBBP3-201ENST00000445497 241 ntBASIC1.41□□□□□ -2.18
RPL39P62891 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL39P62891 AL672167.3-201ENST00000465951 960 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms