Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.11□□□□□ -1.59
HERVK_113P62684 HMGB1P33-201ENST00000563485 527 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.11□□□□□ -1.59
HERVK_113P62684 CKS1BP3-201ENST00000600888 237 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.11□□□□□ -1.59
HERVK_113P62684 AC009268.2-201ENST00000621925 457 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERVK_113P62684 MTND4P29-201ENST00000503122 1372 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 XPOTP1-201ENST00000443317 2398 ntBASIC5.11□□□□□ -1.59
HERVK_113P62684 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AL022322.2-201ENST00000624072 20397 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HERVK_113P62684 GNG5P1-201ENST00000255500 204 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 RN7SKP224-201ENST00000364140 325 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 ARF4P3-201ENST00000397387 509 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 RPS20P2-201ENST00000402520 389 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 COX6CP15-201ENST00000426313 211 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC002381.1-201ENST00000447049 280 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC079448.1-201ENST00000449377 373 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC005008.1-201ENST00000456151 612 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 RPL38P1-201ENST00000460914 211 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 RPL35P6-201ENST00000490024 372 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 RN7SL691P-201ENST00000494487 301 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 OR4R3P-201ENST00000525084 838 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.1□□□□□ -1.59
HERVK_113P62684 RPL21P7-201ENST00000557463 483 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.1□□□□□ -1.59
HERVK_113P62684 MIR4719-201ENST00000585233 84 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 NRBF2P1-201ENST00000587407 859 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC006272.2-201ENST00000594725 163 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC008277.2-201ENST00000605196 797 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 MIR92B-201ENST00000607575 96 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 AC034229.5-201ENST00000624258 185 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 AC009033.1-201ENST00000624279 431 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 CASC19-280ENST00000642102 1351 ntBASIC5.1□□□□□ -1.59
HERVK_113P62684 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.1□□□□□ -1.59
HERVK_113P62684 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERVK_113P62684 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.09□□□□□ -1.59
HERVK_113P62684 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.09□□□□□ -1.59
HERVK_113P62684 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.09□□□□□ -1.59
HERVK_113P62684 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.09□□□□□ -1.59
HERVK_113P62684 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERVK_113P62684 Y_RNA.1-201ENST00000352915 104 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 MIR372-201ENST00000362225 67 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AL359837.1-201ENST00000381357 287 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 SNORD115.1-201ENST00000391109 76 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 FGF7P8-201ENST00000402994 292 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 RNU6-628P-201ENST00000410675 107 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 RN7SKP167-201ENST00000411047 285 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 USP9YP27-201ENST00000418455 438 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AL589872.1-201ENST00000426602 288 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AC096632.1-201ENST00000427395 310 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AC092013.1-201ENST00000438795 332 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AP000542.1-201ENST00000448473 371 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 C1DP4-201ENST00000455429 424 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 RBM43P1-201ENST00000476891 1081 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AC018797.3-201ENST00000513388 1241 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 COX6CP8-201ENST00000522620 226 ntBASIC5.09□□□□□ -1.59
HERVK_113P62684 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.09□□□□□ -1.59
HERVK_113P62684 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.09□□□□□ -1.59
HERVK_113P62684 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms