Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SPRR2C-201ENST00000290702 219 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN20P56880 RNU4-21P-201ENST00000362802 126 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 RNU6-289P-201ENST00000364093 107 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 RNU6-777P-201ENST00000364265 104 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 RNA5SP479-201ENST00000364858 117 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN20P56880 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN20P56880 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AL365184.2-201ENST00000431139 435 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AL590399.6-201ENST00000446396 307 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC002381.1-201ENST00000447049 280 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 PPIAP3-201ENST00000450588 505 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 S100A11P1-201ENST00000477525 312 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC106872.3-201ENST00000495104 446 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 POU5F1P7-201ENST00000508759 541 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC010342.1-201ENST00000514047 877 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN20P56880 OR5AP1P-201ENST00000529730 940 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN20P56880 GTF2IP22-201ENST00000554443 182 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC004223.2-201ENST00000590309 544 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC010680.3-201ENST00000604215 520 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC067959.1-201ENST00000604334 379 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC012360.2-201ENST00000609349 391 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 MIR7151-201ENST00000617477 60 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN20P56880 AC112484.5-201ENST00000624189 228 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 RNA5SP196-201ENST00000625967 102 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN20P56880 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN20P56880 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 MTND4P16-201ENST00000466108 1367 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN20P56880 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN20P56880 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.82
CLDN20P56880 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN20P56880 AC026951.1-201ENST00000559530 2459 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN20P56880 MIR372-201ENST00000362225 67 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 Y_RNA.201-201ENST00000364052 96 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 RNA5SP515-201ENST00000364570 118 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 RNU6-343P-201ENST00000364709 104 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC016907.1-201ENST00000419483 435 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN20P56880 AL590233.1-201ENST00000430017 456 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN20P56880 VN1R108P-201ENST00000431580 830 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 MTCO2P16-201ENST00000436962 677 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 COX6CP2-201ENST00000444980 225 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 BMI1P1-201ENST00000445879 941 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 RPS20P24-201ENST00000457473 361 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC104563.1-201ENST00000476147 376 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC116337.2-201ENST00000477662 156 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC021678.1-201ENST00000505195 936 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 BTF3L4P4-201ENST00000506381 449 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC010625.1-201ENST00000511296 403 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC093853.1-201ENST00000515689 483 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 MIR2116-201ENST00000517221 80 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AP004247.1-201ENST00000531556 1289 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CLDN20P56880 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN20P56880 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN20P56880 AC040904.1-201ENST00000590850 223 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN20P56880 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN20P56880 AP001981.2-201ENST00000603241 418 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AL390208.1-201ENST00000605885 644 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 AL031775.1-201ENST00000607014 887 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 RNU4-89P-201ENST00000607443 133 ntBASIC3.7□□□□□ -1.82
CLDN20P56880 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms