Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN6P56747 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN6P56747 AC012182.1-201ENST00000570133 895 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN6P56747 AC025588.3-201ENST00000604182 274 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 RMST_10.1-201ENST00000616309 154 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 AC092628.2-201ENST00000622492 339 ntBASIC2.99□□□□□ -1.93
CLDN6P56747 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLDN6P56747 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CLDN6P56747 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN6P56747 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN6P56747 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN6P56747 OR1S2-201ENST00000302592 978 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 SKINT1L-201ENST00000401057 817 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 RN7SKP220-201ENST00000410611 288 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AL592148.1-201ENST00000413568 445 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 RPS7P13-201ENST00000413955 498 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AL049610.1-201ENST00000423374 372 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AC096632.1-201ENST00000427395 310 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.98□□□□□ -1.93
CLDN6P56747 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN6P56747 RPL37P4-201ENST00000448908 268 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN6P56747 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN6P56747 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 MTCO3P44-201ENST00000510977 541 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 RN7SKP272-201ENST00000516988 232 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.98□□□□□ -1.93
CLDN6P56747 COX6CP8-201ENST00000522620 226 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AC004217.3-201ENST00000551552 878 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 CYCSP39-201ENST00000565821 309 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 MIR3945-201ENST00000581853 98 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AC022069.1-201ENST00000582910 658 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN6P56747 BNIP3P4-201ENST00000604946 565 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.98□□□□□ -1.93
CLDN6P56747 AP003485.2-201ENST00000623636 610 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN6P56747 AC000403.1-201ENST00000613696 3585 ntBASIC2.98□□□□□ -1.93
CLDN6P56747 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLDN6P56747 AC007496.3-201ENST00000624987 3443 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN6P56747 AF117829.1-206ENST00000621883 3802 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CLDN6P56747 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN6P56747 RNU6-50P-201ENST00000362356 103 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 RNU4-82P-201ENST00000362443 140 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN6P56747 RNU6-339P-201ENST00000384310 107 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 RNU6-441P-201ENST00000384545 106 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN6P56747 AC108734.1-201ENST00000439549 399 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AC092170.1-201ENST00000440211 356 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN6P56747 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN6P56747 HMGN1P18-201ENST00000457642 277 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN6P56747 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN6P56747 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.97□□□□□ -1.93
CLDN6P56747 OR4A45P-201ENST00000529954 901 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN6P56747 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN6P56747 AC095057.3-201ENST00000567102 1157 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN6P56747 AC104984.5-201ENST00000586878 94 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AC008507.1-201ENST00000587506 734 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 OR4H6P-202ENST00000603819 340 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AC136601.2-201ENST00000604356 474 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AC016542.1-201ENST00000608259 493 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 SNORD39.4-201ENST00000620099 78 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 AL136164.4-201ENST00000625013 2135 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN6P56747 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN6P56747 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLDN6P56747 AC017071.1-201ENST00000564407 2204 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN6P56747 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN6P56747 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN6P56747 AC073055.1-201ENST00000456901 1621 ntBASIC2.97□□□□□ -1.93
CLDN6P56747 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN6P56747 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.96□□□□□ -1.93
CLDN6P56747 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CLDN6P56747 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CLDN6P56747 AC004925.1-201ENST00000624256 2706 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CLDN6P56747 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN6P56747 MIR22-201ENST00000362190 85 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CLDN6P56747 AL139095.1-201ENST00000404326 391 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN6P56747 RNU6-77P-201ENST00000410554 91 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms