Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC026523.2-201ENST00000625039 7739 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 MAPK10-304ENST00000641341 3984 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
GFRA1P56159 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GFRA1P56159 AC092747.4-201ENST00000620519 1861 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 LARP1BP1-201ENST00000506036 1359 ntBASIC4.77□□□□□ -1.65
GFRA1P56159 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GFRA1P56159 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA1P56159 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
GFRA1P56159 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA1P56159 API5P2-201ENST00000397055 1498 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
GFRA1P56159 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.76□□□□□ -1.65
GFRA1P56159 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 XIAPP3-201ENST00000312918 795 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 U8.4-201ENST00000363626 134 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 RNU6-61P-201ENST00000365528 109 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 RNU6-1227P-201ENST00000383981 107 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 Y_RNA.530-201ENST00000384587 101 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.76□□□□□ -1.65
GFRA1P56159 AC114491.1-201ENST00000416095 246 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.76□□□□□ -1.65
GFRA1P56159 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.76□□□□□ -1.65
GFRA1P56159 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.76□□□□□ -1.65
GFRA1P56159 AC005534.2-201ENST00000431047 433 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC236972.2-201ENST00000434979 310 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 HMGB3P9-201ENST00000441799 583 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 MTCO3P45-201ENST00000443036 613 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AL591623.2-201ENST00000449978 222 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.76□□□□□ -1.65
GFRA1P56159 snoU13.3-201ENST00000459441 104 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 RN7SL515P-201ENST00000463999 297 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AP000797.2-201ENST00000475768 606 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 RN7SL591P-201ENST00000496150 292 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 IGBP1P4-201ENST00000503202 879 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA1P56159 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 FAM206BP-201ENST00000510179 541 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC108078.2-201ENST00000510750 236 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 HMGN1P9-201ENST00000515212 298 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.76□□□□□ -1.65
GFRA1P56159 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
GFRA1P56159 AC026951.1-201ENST00000559530 2459 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.76□□□□□ -1.65
GFRA1P56159 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.76□□□□□ -1.65
GFRA1P56159 AC024619.4-201ENST00000580924 316 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC007448.1-201ENST00000582714 234 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AP001521.2-201ENST00000608772 546 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AL121612.2-201ENST00000612261 482 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AL390240.1-201ENST00000612950 384 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 AC126177.8-201ENST00000618339 1015 ntBASIC4.76□□□□□ -1.65
GFRA1P56159 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA1P56159 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA1P56159 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GFRA1P56159 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.76□□□□□ -1.65
GFRA1P56159 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.76□□□□□ -1.65
GFRA1P56159 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 AL592437.2-201ENST00000421655 2434 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.75□□□□□ -1.65
GFRA1P56159 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 U3.3-201ENST00000362986 216 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RNU6-1249P-201ENST00000363237 111 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RNU1-19P-201ENST00000363306 165 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RNU6-522P-201ENST00000364497 107 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RNU6-1013P-201ENST00000384180 107 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RNU6-831P-201ENST00000384548 107 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AL583835.1-201ENST00000399570 407 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AL592114.1-201ENST00000403842 483 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 U3.36-201ENST00000408418 213 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RNU4-46P-201ENST00000410818 138 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AL354751.2-201ENST00000415471 210 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC018644.1-201ENST00000429934 551 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 BX276092.6-201ENST00000430476 250 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA1P56159 BX276092.8-201ENST00000455722 250 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 RPL21P103-201ENST00000479921 488 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA1P56159 RPS24P16-201ENST00000497294 392 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC104806.1-201ENST00000508720 308 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA1P56159 RNU6-1095P-201ENST00000516148 108 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms