Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDH12P55289 RNU6-28P-201ENST00000362378 107 ntBASIC3.86□□□□□ -1.79
CDH12P55289 RNU6-517P-201ENST00000384362 110 ntBASIC3.86□□□□□ -1.79
CDH12P55289 RNU6-878P-201ENST00000384578 110 ntBASIC3.86□□□□□ -1.79
CDH12P55289 ELOCP17-201ENST00000414751 326 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH12P55289 MTATP6P27-201ENST00000416987 621 ntBASIC3.86□□□□□ -1.79
CDH12P55289 USP9YP13-201ENST00000417797 480 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AIMP1P1-201ENST00000418670 937 ntBASIC3.86□□□□□ -1.79
CDH12P55289 MTCO3P30-201ENST00000426425 670 ntBASIC3.86□□□□□ -1.79
CDH12P55289 OR51AB1P-201ENST00000429046 620 ntBASIC3.86□□□□□ -1.79
CDH12P55289 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 AC091862.1-201ENST00000438016 1100 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC244505.5-201ENST00000443639 207 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH12P55289 AL033528.1-201ENST00000453780 140 ntBASIC3.86□□□□□ -1.79
CDH12P55289 Z82190.1-201ENST00000454534 490 ntBASIC3.86□□□□□ -1.79
CDH12P55289 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH12P55289 KLF3P2-201ENST00000465138 268 ntBASIC3.86□□□□□ -1.79
CDH12P55289 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 AC104563.1-201ENST00000476147 376 ntBASIC3.86□□□□□ -1.79
CDH12P55289 LARP1BP2-201ENST00000486594 519 ntBASIC3.86□□□□□ -1.79
CDH12P55289 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 RN7SL810P-201ENST00000493031 276 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH12P55289 AC005798.1-201ENST00000513715 387 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC093853.1-201ENST00000515689 483 ntBASIC3.86□□□□□ -1.79
CDH12P55289 HIGD1AP3-201ENST00000515857 278 ntBASIC3.86□□□□□ -1.79
CDH12P55289 IGKV2D-36-201ENST00000518643 226 ntBASIC3.86□□□□□ -1.79
CDH12P55289 IGLVIV-53-201ENST00000520107 367 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC022878.1-201ENST00000530684 149 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC024224.1-201ENST00000538284 609 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH12P55289 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH12P55289 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH12P55289 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH12P55289 AL353997.4-201ENST00000586196 166 ntBASIC3.86□□□□□ -1.79
CDH12P55289 BNIP3P8-201ENST00000597863 560 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC091965.4-201ENST00000607691 587 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC108747.1-201ENST00000609508 535 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC128687.2-201ENST00000609657 566 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AC138749.5-201ENST00000611461 208 ntBASIC3.86□□□□□ -1.79
CDH12P55289 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 AC116165.2-201ENST00000616705 206 ntBASIC3.86□□□□□ -1.79
CDH12P55289 RMST_9.1-201ENST00000619945 193 ntBASIC3.86□□□□□ -1.79
CDH12P55289 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH12P55289 NUP58P1-201ENST00000502546 1738 ntBASIC3.86□□□□□ -1.79
CDH12P55289 AL133412.1-201ENST00000380194 2992 ntBASIC3.86□□□□□ -1.79
CDH12P55289 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CDH12P55289 AL049780.3-201ENST00000624612 1583 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC027514.1-201ENST00000588561 1603 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH12P55289 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 MARK2P15-201ENST00000432204 2186 ntBASIC3.85□□□□□ -1.79
CDH12P55289 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
CDH12P55289 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 RNA5SP36-201ENST00000410197 133 ntBASIC3.85□□□□□ -1.79
CDH12P55289 Y_RNA.608-201ENST00000410647 95 ntBASIC3.85□□□□□ -1.79
CDH12P55289 RN7SKP235-201ENST00000410662 305 ntBASIC3.85□□□□□ -1.79
CDH12P55289 RN7SKP33-201ENST00000410942 340 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 AC127526.1-201ENST00000417526 366 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 MTND1P4-201ENST00000435196 415 ntBASIC3.85□□□□□ -1.79
CDH12P55289 PGBD4P3-201ENST00000440731 581 ntBASIC3.85□□□□□ -1.79
CDH12P55289 IFNWP4-201ENST00000453148 294 ntBASIC3.85□□□□□ -1.79
CDH12P55289 SBDSP1-204ENST00000453858 737 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AP001992.1-205ENST00000462248 379 ntBASIC3.85□□□□□ -1.79
CDH12P55289 RPL23AP2-201ENST00000471227 466 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC087312.1-201ENST00000471411 480 ntBASIC3.85□□□□□ -1.79
CDH12P55289 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH12P55289 OR5H5P-201ENST00000503164 928 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC138853.1-201ENST00000503549 823 ntBASIC3.85□□□□□ -1.79
CDH12P55289 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH12P55289 RNA5SP73-201ENST00000516744 108 ntBASIC3.85□□□□□ -1.79
CDH12P55289 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH12P55289 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 AC090281.1-201ENST00000523019 276 ntBASIC3.85□□□□□ -1.79
CDH12P55289 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH12P55289 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 TRAV8-5-201ENST00000537369 341 ntBASIC3.85□□□□□ -1.79
CDH12P55289 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH12P55289 AL161713.1-201ENST00000555538 145 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH12P55289 AC068831.4-201ENST00000556118 109 ntBASIC3.85□□□□□ -1.79
CDH12P55289 ZNF519P3-201ENST00000557158 1032 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms