Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
NUP98P52948 AC092045.1-201ENST00000495716 1231 ntBASIC2.84□□□□□ -1.95
NUP98P52948 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.84□□□□□ -1.95
NUP98P52948 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.84□□□□□ -1.95
NUP98P52948 USP9YP5-201ENST00000511770 630 ntBASIC2.84□□□□□ -1.95
NUP98P52948 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NUP98P52948 TPMTP1-201ENST00000592307 737 ntBASIC2.84□□□□□ -1.95
NUP98P52948 AC078899.3-201ENST00000599065 212 ntBASIC2.84□□□□□ -1.95
NUP98P52948 AC068722.2-201ENST00000618734 544 ntBASIC2.84□□□□□ -1.95
NUP98P52948 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.84□□□□□ -1.95
NUP98P52948 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUP98P52948 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUP98P52948 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
NUP98P52948 MIR21-201ENST00000362134 72 ntBASIC2.84□□□□□ -1.96
NUP98P52948 AL034374.1-201ENST00000406329 351 ntBASIC2.84□□□□□ -1.96
NUP98P52948 NDUFB4P5-201ENST00000415445 361 ntBASIC2.84□□□□□ -1.96
NUP98P52948 AC012498.1-201ENST00000424037 437 ntBASIC2.84□□□□□ -1.96
NUP98P52948 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.84□□□□□ -1.96
NUP98P52948 HMGB3P12-201ENST00000438745 556 ntBASIC2.84□□□□□ -1.96
NUP98P52948 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.84□□□□□ -1.96
NUP98P52948 AC010683.1-201ENST00000473673 378 ntBASIC2.84□□□□□ -1.96
NUP98P52948 GAPDHP39-201ENST00000481866 979 ntBASIC2.84□□□□□ -1.96
NUP98P52948 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.84□□□□□ -1.96
NUP98P52948 DEFB122-202ENST00000569013 197 ntBASIC2.84□□□□□ -1.96
NUP98P52948 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.96
NUP98P52948 AC103710.2-201ENST00000609912 942 ntBASIC2.84□□□□□ -1.96
NUP98P52948 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NUP98P52948 SNORA64-201ENST00000384674 134 ntBASIC2.83□□□□□ -1.96
NUP98P52948 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP98P52948 AC107081.1-201ENST00000414975 361 ntBASIC2.83□□□□□ -1.96
NUP98P52948 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.83□□□□□ -1.96
NUP98P52948 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.83□□□□□ -1.96
NUP98P52948 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.83□□□□□ -1.96
NUP98P52948 AC093331.1-201ENST00000521474 169 ntBASIC2.83□□□□□ -1.96
NUP98P52948 AC006116.7-201ENST00000590141 756 ntBASIC2.83□□□□□ -1.96
NUP98P52948 AC009831.4-201ENST00000620744 325 ntBASIC2.83□□□□□ -1.96
NUP98P52948 AL160394.1-201ENST00000624765 724 ntBASIC2.83□□□□□ -1.96
NUP98P52948 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
NUP98P52948 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NUP98P52948 MTCO1P14-201ENST00000441695 1559 ntBASIC2.83□□□□□ -1.96
NUP98P52948 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NUP98P52948 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP98P52948 SEPT7P6-201ENST00000469999 1143 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 BDH2P1-201ENST00000602288 736 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AL645944.1-201ENST00000603857 493 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AL136981.2-201ENST00000617319 734 ntBASIC2.82□□□□□ -1.96
NUP98P52948 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP98P52948 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NUP98P52948 RNU1-91P-201ENST00000364746 163 ntBASIC2.82□□□□□ -1.96
NUP98P52948 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP98P52948 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP98P52948 AC009965.2-201ENST00000425328 970 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.82□□□□□ -1.96
NUP98P52948 HMGB1P41-201ENST00000520234 440 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 CBX3P5-201ENST00000552017 521 ntBASIC2.82□□□□□ -1.96
NUP98P52948 SNRPGP18-201ENST00000553000 214 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AL161713.1-201ENST00000555538 145 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.82□□□□□ -1.96
NUP98P52948 AC105137.2-201ENST00000569073 466 ntBASIC2.82□□□□□ -1.96
NUP98P52948 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 AC016252.1-201ENST00000609721 474 ntBASIC2.82□□□□□ -1.96
NUP98P52948 AL356266.1-201ENST00000623311 483 ntBASIC2.82□□□□□ -1.96
NUP98P52948 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.82□□□□□ -1.96
NUP98P52948 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUP98P52948 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP98P52948 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NUP98P52948 FAM133CP-201ENST00000332869 704 ntBASIC2.81□□□□□ -1.96
NUP98P52948 RNU6-167P-201ENST00000384292 106 ntBASIC2.81□□□□□ -1.96
NUP98P52948 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP98P52948 AIMP1P1-201ENST00000418670 937 ntBASIC2.81□□□□□ -1.96
NUP98P52948 RPL9P32-201ENST00000464118 620 ntBASIC2.81□□□□□ -1.96
NUP98P52948 RPL21P99-201ENST00000480369 423 ntBASIC2.81□□□□□ -1.96
NUP98P52948 AC010627.1-201ENST00000503819 1294 ntBASIC2.81□□□□□ -1.96
NUP98P52948 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP98P52948 EEF1A1P37-201ENST00000522748 715 ntBASIC2.81□□□□□ -1.96
NUP98P52948 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP98P52948 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.81□□□□□ -1.96
NUP98P52948 AL389895.1-201ENST00000554127 252 ntBASIC2.81□□□□□ -1.96
NUP98P52948 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.81□□□□□ -1.96
NUP98P52948 AC025281.1-201ENST00000567026 265 ntBASIC2.81□□□□□ -1.96
NUP98P52948 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.81□□□□□ -1.96
NUP98P52948 AC026634.1-201ENST00000634369 198 ntBASIC2.81□□□□□ -1.96
NUP98P52948 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NUP98P52948 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.81□□□□□ -1.96
NUP98P52948 AC008432.1-201ENST00000615912 1320 ntBASIC2.8□□□□□ -1.96
NUP98P52948 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
NUP98P52948 AL513477.1-202ENST00000417061 214 ntBASIC2.8□□□□□ -1.96
NUP98P52948 RPS15AP28-201ENST00000435088 386 ntBASIC2.8□□□□□ -1.96
NUP98P52948 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.8□□□□□ -1.96
NUP98P52948 IFNA11P-201ENST00000446352 526 ntBASIC2.8□□□□□ -1.96
NUP98P52948 HMGB1P15-201ENST00000453854 435 ntBASIC2.8□□□□□ -1.96
NUP98P52948 AC114982.2-201ENST00000461396 358 ntBASIC2.8□□□□□ -1.96
NUP98P52948 AC023050.1-201ENST00000498198 304 ntBASIC2.8□□□□□ -1.96
NUP98P52948 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.8□□□□□ -1.96
NUP98P52948 RANP3-201ENST00000530970 276 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms