Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.56□□□□□ -2
GTF2A1P52655 AP004371.1-201ENST00000525240 214 ntBASIC2.56□□□□□ -2
GTF2A1P52655 MTND2P26-201ENST00000528255 1029 ntBASIC2.56□□□□□ -2
GTF2A1P52655 OR5BN1P-201ENST00000532955 829 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.56□□□□□ -2
GTF2A1P52655 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.56□□□□□ -2
GTF2A1P52655 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.56□□□□□ -2
GTF2A1P52655 AL606834.2-201ENST00000602954 668 ntBASIC2.56□□□□□ -2
GTF2A1P52655 U73023.1-201ENST00000603134 700 ntBASIC2.56□□□□□ -2
GTF2A1P52655 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.56□□□□□ -2
GTF2A1P52655 AL162574.2-201ENST00000614618 657 ntBASIC2.56□□□□□ -2
GTF2A1P52655 CU459211.1-201ENST00000635667 749 ntBASIC2.56□□□□□ -2
GTF2A1P52655 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.56□□□□□ -2
GTF2A1P52655 AC024341.1-201ENST00000526444 1552 ntBASIC2.56□□□□□ -2
GTF2A1P52655 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
GTF2A1P52655 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.55□□□□□ -2
GTF2A1P52655 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
GTF2A1P52655 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
GTF2A1P52655 MIRLET7G-201ENST00000362280 84 ntBASIC2.55□□□□□ -2
GTF2A1P52655 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.55□□□□□ -2
GTF2A1P52655 RNU6-629P-201ENST00000384061 103 ntBASIC2.55□□□□□ -2
GTF2A1P52655 RNU1-52P-201ENST00000384190 164 ntBASIC2.55□□□□□ -2
GTF2A1P52655 RNU4-47P-201ENST00000410876 114 ntBASIC2.55□□□□□ -2
GTF2A1P52655 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.55□□□□□ -2
GTF2A1P52655 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.55□□□□□ -2
GTF2A1P52655 AL159987.2-201ENST00000432754 307 ntBASIC2.55□□□□□ -2
GTF2A1P52655 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.55□□□□□ -2
GTF2A1P52655 RABEPKP1-201ENST00000440529 1026 ntBASIC2.55□□□□□ -2
GTF2A1P52655 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.55□□□□□ -2
GTF2A1P52655 NPM1P13-201ENST00000452663 865 ntBASIC2.55□□□□□ -2
GTF2A1P52655 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.55□□□□□ -2
GTF2A1P52655 AC008427.1-201ENST00000503102 655 ntBASIC2.55□□□□□ -2
GTF2A1P52655 HMGB1P22-201ENST00000505315 124 ntBASIC2.55□□□□□ -2
GTF2A1P52655 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.55□□□□□ -2
GTF2A1P52655 RN7SKP272-201ENST00000516988 232 ntBASIC2.55□□□□□ -2
GTF2A1P52655 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.55□□□□□ -2
GTF2A1P52655 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.55□□□□□ -2
GTF2A1P52655 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.55□□□□□ -2
GTF2A1P52655 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.55□□□□□ -2
GTF2A1P52655 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.55□□□□□ -2
GTF2A1P52655 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.55□□□□□ -2
GTF2A1P52655 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.55□□□□□ -2
GTF2A1P52655 VN1R74P-201ENST00000613259 503 ntBASIC2.55□□□□□ -2
GTF2A1P52655 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.55□□□□□ -2
GTF2A1P52655 AP000553.5-201ENST00000641933 54 ntBASIC2.55□□□□□ -2
GTF2A1P52655 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.55□□□□□ -2
GTF2A1P52655 AC004944.1-201ENST00000517807 3059 ntBASIC2.54□□□□□ -2
GTF2A1P52655 RNU6-618P-201ENST00000363518 112 ntBASIC2.54□□□□□ -2
GTF2A1P52655 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.54□□□□□ -2
GTF2A1P52655 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
GTF2A1P52655 RPLP0P7-201ENST00000416050 667 ntBASIC2.54□□□□□ -2
GTF2A1P52655 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.54□□□□□ -2
GTF2A1P52655 RPL36AP36-201ENST00000418616 301 ntBASIC2.54□□□□□ -2
GTF2A1P52655 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.54□□□□□ -2
GTF2A1P52655 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.54□□□□□ -2
GTF2A1P52655 AC093156.1-201ENST00000440382 670 ntBASIC2.54□□□□□ -2
GTF2A1P52655 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.54□□□□□ -2
GTF2A1P52655 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.54□□□□□ -2
GTF2A1P52655 PDSS1P2-201ENST00000449397 678 ntBASIC2.54□□□□□ -2
GTF2A1P52655 OR6C72P-201ENST00000451403 892 ntBASIC2.54□□□□□ -2
GTF2A1P52655 RPS24P6-201ENST00000452670 400 ntBASIC2.54□□□□□ -2
GTF2A1P52655 BTF3P5-201ENST00000457252 467 ntBASIC2.54□□□□□ -2
GTF2A1P52655 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
GTF2A1P52655 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.54□□□□□ -2
GTF2A1P52655 AC006499.5-201ENST00000505037 514 ntBASIC2.54□□□□□ -2
GTF2A1P52655 AP001960.1-201ENST00000506494 658 ntBASIC2.54□□□□□ -2
GTF2A1P52655 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.54□□□□□ -2
GTF2A1P52655 RNU6-1308P-201ENST00000516817 103 ntBASIC2.54□□□□□ -2
GTF2A1P52655 NDUFS5P6-201ENST00000529136 295 ntBASIC2.54□□□□□ -2
GTF2A1P52655 RPL23AP84-201ENST00000571193 464 ntBASIC2.54□□□□□ -2
GTF2A1P52655 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.54□□□□□ -2
GTF2A1P52655 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.54□□□□□ -2
GTF2A1P52655 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
GTF2A1P52655 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
GTF2A1P52655 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.53□□□□□ -2
GTF2A1P52655 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.53□□□□□ -2
GTF2A1P52655 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GTF2A1P52655 ATP5F1P3-201ENST00000397213 657 ntBASIC2.53□□□□□ -2
GTF2A1P52655 RNU4-72P-201ENST00000410754 173 ntBASIC2.53□□□□□ -2
GTF2A1P52655 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.53□□□□□ -2
GTF2A1P52655 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 AL513043.1-201ENST00000439124 535 ntBASIC2.53□□□□□ -2
GTF2A1P52655 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.53□□□□□ -2
GTF2A1P52655 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.53□□□□□ -2
GTF2A1P52655 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 AC126182.1-201ENST00000478134 357 ntBASIC2.53□□□□□ -2
GTF2A1P52655 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.53□□□□□ -2
GTF2A1P52655 RAC1P5-201ENST00000512182 576 ntBASIC2.53□□□□□ -2
GTF2A1P52655 AC025755.1-201ENST00000521306 278 ntBASIC2.53□□□□□ -2
GTF2A1P52655 ERHP1-201ENST00000523006 310 ntBASIC2.53□□□□□ -2
GTF2A1P52655 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.53□□□□□ -2
GTF2A1P52655 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.53□□□□□ -2
GTF2A1P52655 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.53□□□□□ -2
GTF2A1P52655 MIR5680-201ENST00000577577 84 ntBASIC2.53□□□□□ -2
GTF2A1P52655 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms