Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.47□□□□□ -1.69
NEK3P51956 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEK3P51956 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NEK3P51956 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NEK3P51956 PABPC1P9-201ENST00000426076 1612 ntBASIC4.47□□□□□ -1.69
NEK3P51956 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEK3P51956 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.47□□□□□ -1.69
NEK3P51956 RNU5F-6P-201ENST00000362979 116 ntBASIC4.47□□□□□ -1.69
NEK3P51956 RNU5F-7P-201ENST00000363696 115 ntBASIC4.47□□□□□ -1.69
NEK3P51956 RNU6-882P-201ENST00000391025 103 ntBASIC4.47□□□□□ -1.69
NEK3P51956 RNU2-43P-201ENST00000410306 190 ntBASIC4.47□□□□□ -1.69
NEK3P51956 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.47□□□□□ -1.69
NEK3P51956 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.47□□□□□ -1.69
NEK3P51956 AC004866.2-201ENST00000438285 481 ntBASIC4.47□□□□□ -1.69
NEK3P51956 KATNBL1P3-201ENST00000443475 909 ntBASIC4.47□□□□□ -1.69
NEK3P51956 DHFRP3-201ENST00000455595 559 ntBASIC4.47□□□□□ -1.69
NEK3P51956 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.47□□□□□ -1.69
NEK3P51956 RPL31P3-201ENST00000458430 332 ntBASIC4.47□□□□□ -1.69
NEK3P51956 BNIP3P41-201ENST00000503774 571 ntBASIC4.47□□□□□ -1.69
NEK3P51956 KLHL2P1-201ENST00000508691 521 ntBASIC4.47□□□□□ -1.69
NEK3P51956 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.47□□□□□ -1.69
NEK3P51956 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 NDUFA5P2-201ENST00000519723 344 ntBASIC4.47□□□□□ -1.69
NEK3P51956 PARP1P2-201ENST00000556806 195 ntBASIC4.47□□□□□ -1.69
NEK3P51956 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.47□□□□□ -1.69
NEK3P51956 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 ACTR3BP3-201ENST00000565577 979 ntBASIC4.47□□□□□ -1.69
NEK3P51956 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 AL731566.2-201ENST00000618971 317 ntBASIC4.47□□□□□ -1.69
NEK3P51956 AC011944.2-201ENST00000624440 683 ntBASIC4.47□□□□□ -1.69
NEK3P51956 AP002001.2-201ENST00000529025 1469 ntBASIC4.47□□□□□ -1.69
NEK3P51956 AC027290.2-201ENST00000623210 18662 ntBASIC4.47□□□□□ -1.69
NEK3P51956 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NEK3P51956 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NEK3P51956 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.47□□□□□ -1.69
NEK3P51956 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.46□□□□□ -1.69
NEK3P51956 TAB3P1-202ENST00000452645 1634 ntBASIC4.46□□□□□ -1.69
NEK3P51956 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NEK3P51956 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NEK3P51956 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
NEK3P51956 AL133383.2-201ENST00000622958 2336 ntBASIC4.46□□□□□ -1.69
NEK3P51956 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
NEK3P51956 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.69
NEK3P51956 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.46□□□□□ -1.7
NEK3P51956 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEK3P51956 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
NEK3P51956 MTND5P33-201ENST00000571250 1450 ntBASIC4.46□□□□□ -1.7
NEK3P51956 RNU6-600P-201ENST00000362524 99 ntBASIC4.46□□□□□ -1.7
NEK3P51956 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
NEK3P51956 MIR135A2-201ENST00000384854 100 ntBASIC4.46□□□□□ -1.7
NEK3P51956 SNORA26.8-201ENST00000391306 124 ntBASIC4.46□□□□□ -1.7
NEK3P51956 MIR1302-8-201ENST00000408342 128 ntBASIC4.46□□□□□ -1.7
NEK3P51956 RN7SKP235-201ENST00000410662 305 ntBASIC4.46□□□□□ -1.7
NEK3P51956 RNA5SP104-201ENST00000410989 118 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AC011933.1-201ENST00000413334 321 ntBASIC4.46□□□□□ -1.7
NEK3P51956 NPM1P11-201ENST00000417106 855 ntBASIC4.46□□□□□ -1.7
NEK3P51956 BX119904.4-201ENST00000424402 301 ntBASIC4.46□□□□□ -1.7
NEK3P51956 MTCO1P39-201ENST00000426148 480 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.46□□□□□ -1.7
NEK3P51956 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.46□□□□□ -1.7
NEK3P51956 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.46□□□□□ -1.7
NEK3P51956 COX6CP2-201ENST00000444980 225 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AC116533.1-201ENST00000459748 321 ntBASIC4.46□□□□□ -1.7
NEK3P51956 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.46□□□□□ -1.7
NEK3P51956 AC004062.1-201ENST00000509926 645 ntBASIC4.46□□□□□ -1.7
NEK3P51956 FTH1P9-201ENST00000513251 355 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.46□□□□□ -1.7
NEK3P51956 RNA5SP309-201ENST00000516670 106 ntBASIC4.46□□□□□ -1.7
NEK3P51956 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.46□□□□□ -1.7
NEK3P51956 HMGN1P28-201ENST00000521340 364 ntBASIC4.46□□□□□ -1.7
NEK3P51956 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.46□□□□□ -1.7
NEK3P51956 AL352979.3-201ENST00000553515 247 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AC007424.1-203ENST00000554613 687 ntBASIC4.46□□□□□ -1.7
NEK3P51956 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.46□□□□□ -1.7
NEK3P51956 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.46□□□□□ -1.7
NEK3P51956 AC009101.1-201ENST00000568135 242 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AC136624.4-201ENST00000573044 370 ntBASIC4.46□□□□□ -1.7
NEK3P51956 MIR3690-201ENST00000580266 75 ntBASIC4.46□□□□□ -1.7
NEK3P51956 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
NEK3P51956 AC113403.1-201ENST00000604910 193 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AL158211.4-201ENST00000606988 584 ntBASIC4.46□□□□□ -1.7
NEK3P51956 Z98200.1-201ENST00000607298 470 ntBASIC4.46□□□□□ -1.7
NEK3P51956 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.46□□□□□ -1.7
NEK3P51956 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.46□□□□□ -1.7
NEK3P51956 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEK3P51956 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEK3P51956 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEK3P51956 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.45□□□□□ -1.7
NEK3P51956 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NEK3P51956 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NEK3P51956 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NEK3P51956 RNU4-21P-201ENST00000362802 126 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms