Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC244258.1-201ENST00000637553 1071 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 AL392088.2-201ENST00000637607 285 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 ZNF663P-202ENST00000641770 1131 ntBASIC2.89□□□□□ -1.95
CX3CR1P49238 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.88□□□□□ -1.95
CX3CR1P49238 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 RNU1-70P-201ENST00000362618 164 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 RNU6-839P-201ENST00000363347 108 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AL133264.1-201ENST00000407157 562 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 RPL36AP36-201ENST00000418616 301 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 KRR1P1-201ENST00000419430 803 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC006960.1-201ENST00000419980 153 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.88□□□□□ -1.95
CX3CR1P49238 HSPE1P1-201ENST00000421494 318 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC233728.2-201ENST00000425348 757 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 SNRPEP4-201ENST00000435815 279 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AC241584.1-201ENST00000438469 1241 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AL645638.1-201ENST00000440519 361 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AL592437.1-201ENST00000443781 492 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AC091564.1-201ENST00000464563 479 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CR1P49238 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 ERHP1-201ENST00000523006 310 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 MTCO1P49-201ENST00000523429 802 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AP001317.1-201ENST00000531194 960 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CR1P49238 ZNF971P-201ENST00000562068 1249 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 BNIP3P5-201ENST00000562290 498 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 SULT1C2P1-202ENST00000562418 459 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CR1P49238 FAM60BP-201ENST00000578364 658 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 MIR4276-201ENST00000584832 70 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.88□□□□□ -1.95
CX3CR1P49238 RPAP2P1-201ENST00000603626 1168 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AL162713.1-201ENST00000604480 262 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CR1P49238 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 AL512506.2-201ENST00000624472 458 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AC012442.3-202ENST00000636742 206 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CX3CR1P49238 AL079305.1-201ENST00000623159 3008 ntBASIC2.88□□□□□ -1.95
CX3CR1P49238 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CX3CR1P49238 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CR1P49238 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.87□□□□□ -1.95
CX3CR1P49238 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC016769.3-201ENST00000396562 315 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 CYCSP45-201ENST00000402289 315 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 BX323014.1-201ENST00000412876 237 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 HSFY4P-201ENST00000415994 1181 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 MTND4LP10-201ENST00000435146 291 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AC009969.1-201ENST00000438726 172 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AL359073.1-201ENST00000448036 403 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC115115.1-201ENST00000449927 248 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 RPL36AP33-201ENST00000450395 310 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AL445669.2-201ENST00000454425 421 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 RPL7P38-201ENST00000488396 739 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 RN7SL283P-201ENST00000489055 303 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 RNA5SP217-201ENST00000515959 91 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AL391156.1-201ENST00000554965 554 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AC005951.1-201ENST00000576706 485 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 MIR3922-201ENST00000585192 84 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 AC006130.2-201ENST00000586202 326 ntBASIC2.87□□□□□ -1.95
CX3CR1P49238 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.87□□□□□ -1.95
CX3CR1P49238 AL020997.2-201ENST00000602607 184 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms