Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TXNP1-201ENST00000441872 371 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 RPS26P56-201ENST00000444468 240 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC125238.1-201ENST00000448842 249 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC021146.5-201ENST00000503544 545 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC020699.1-201ENST00000505161 445 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC011352.3-201ENST00000505162 593 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 PTGES3P3-201ENST00000511479 482 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC068657.1-201ENST00000520807 306 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AGGF1P5-201ENST00000567900 919 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 MIR3200-201ENST00000580767 85 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 VN1R83P-201ENST00000595685 445 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 AL450336.1-201ENST00000605180 586 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC009974.1-201ENST00000608881 455 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 AL049555.1-201ENST00000562834 1933 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC025125.1-201ENST00000624743 1922 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.7□□□□□ -1.82
NEDD4P46934 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 AP005901.5-201ENST00000545779 1796 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 RNU4-92P-201ENST00000363783 136 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 RNU6-444P-201ENST00000383988 108 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 SNORD116-23-201ENST00000384645 92 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL121978.1-201ENST00000402778 359 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL139098.1-201ENST00000407291 389 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 SSR1P2-201ENST00000415208 787 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL356320.2-201ENST00000417263 507 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC006960.1-201ENST00000419980 153 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL138785.1-201ENST00000425821 331 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC010881.1-201ENST00000433830 235 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 B3GNT2P1-201ENST00000434960 952 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 NANOGP2-201ENST00000435391 727 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC108734.1-201ENST00000439549 399 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC079776.3-201ENST00000450665 370 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 RPS15AP1-201ENST00000457423 391 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 PNPLA4P1-201ENST00000458328 305 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 RNU7-170P-201ENST00000459303 61 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 NIPA2P2-201ENST00000496376 1083 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 BOLA3P3-201ENST00000505182 232 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 MTATP6P22-201ENST00000507369 598 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 TXNP6-201ENST00000510190 310 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC110792.2-201ENST00000510278 224 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC109471.1-201ENST00000511631 612 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 RNU6-202P-201ENST00000515998 96 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.7□□□□□ -1.82
NEDD4P46934 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 CBX3P5-201ENST00000552017 521 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AGGF1P8-201ENST00000562979 1000 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD4P46934 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC069545.1-201ENST00000605671 358 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 AL512506.2-201ENST00000624472 458 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NEDD4P46934 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD4P46934 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD4P46934 AC011978.2-201ENST00000569835 2054 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD4P46934 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC073325.2-201ENST00000339545 159 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RNU6-582P-201ENST00000362989 107 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RNU6-1066P-201ENST00000363573 105 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms