Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ELOCP9-201ENST00000418624 239 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 RPL21P32-201ENST00000419877 477 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.73□□□□□ -1.81
HNF4AP41235 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.73□□□□□ -1.81
HNF4AP41235 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.73□□□□□ -1.81
HNF4AP41235 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 DNAJC19P1-201ENST00000455312 319 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 PNPLA4P1-201ENST00000458328 305 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 RN7SL93P-201ENST00000463035 293 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC069528.1-202ENST00000482888 637 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC004069.2-201ENST00000505438 1114 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 AC010460.1-201ENST00000507087 466 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 SNORA31.8-201ENST00000516327 108 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 RNA5SP164-201ENST00000516533 110 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 RNU6-1261P-201ENST00000517194 104 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.73□□□□□ -1.81
HNF4AP41235 AC023050.2-201ENST00000544968 387 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 AL163153.1-201ENST00000554223 283 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 AC009094.1-201ENST00000564443 426 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 BNIP3P24-201ENST00000593398 557 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 U7.8-201ENST00000619968 63 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AC068831.8-201ENST00000620171 435 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 MKKS-204ENST00000639674 192 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HNF4AP41235 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HNF4AP41235 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HNF4AP41235 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HNF4AP41235 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HNF4AP41235 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HNF4AP41235 OR5H2-201ENST00000355273 945 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HNF4AP41235 Y_RNA.25-201ENST00000362528 102 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 RNU1-18P-201ENST00000363062 164 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 RNU6-1214P-201ENST00000363650 109 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 RNU4-40P-201ENST00000364351 143 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 RNA5SP515-201ENST00000364570 118 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.72□□□□□ -1.81
HNF4AP41235 SNORD65.1-201ENST00000390889 71 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AL590704.1-201ENST00000402856 794 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 HMGB3P23-201ENST00000414981 585 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 LUZP4P1-201ENST00000415420 344 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.72□□□□□ -1.81
HNF4AP41235 RPL7P2-201ENST00000427639 268 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC079780.1-201ENST00000428259 207 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 RPS29P7-201ENST00000439662 171 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC093155.1-201ENST00000440164 826 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 SETD6P1-201ENST00000444575 317 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.72□□□□□ -1.81
HNF4AP41235 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.72□□□□□ -1.81
HNF4AP41235 RNU6-1095P-201ENST00000516148 108 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 RN7SKP21-201ENST00000516503 220 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 SUMO2P20-201ENST00000520803 283 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC022695.1-201ENST00000522089 237 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HNF4AP41235 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.72□□□□□ -1.81
HNF4AP41235 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.72□□□□□ -1.81
HNF4AP41235 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.72□□□□□ -1.81
HNF4AP41235 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AP001269.3-201ENST00000588718 329 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.72□□□□□ -1.81
HNF4AP41235 AL353778.1-201ENST00000603149 408 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.72□□□□□ -1.81
HNF4AP41235 AC093783.1-201ENST00000612976 329 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
HNF4AP41235 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HNF4AP41235 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.72□□□□□ -1.81
HNF4AP41235 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HNF4AP41235 AC012321.1-201ENST00000561622 1588 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
HNF4AP41235 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HNF4AP41235 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HNF4AP41235 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HNF4AP41235 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HNF4AP41235 snoZ40.1-201ENST00000364540 72 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 HMGN2P8-201ENST00000391458 268 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AL049545.1-201ENST00000401856 572 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 MIR1193-201ENST00000408109 78 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.71□□□□□ -1.82
HNF4AP41235 RN7SKP263-201ENST00000411194 309 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 Z75741.2-201ENST00000417272 1167 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 GLRXP1-201ENST00000423261 334 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 RPF2P1-201ENST00000424137 906 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 RPS6P15-201ENST00000431996 751 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.71□□□□□ -1.82
HNF4AP41235 SETP8-201ENST00000435341 628 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 MTCYBP34-201ENST00000439552 670 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 FGF7P5-201ENST00000441829 291 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 MTND2P22-201ENST00000444325 1033 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AC079776.3-201ENST00000450665 370 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 RFC5P1-201ENST00000454419 874 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms