Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 TPT1P13-201ENST00000449760 499 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AL450023.1-201ENST00000450868 751 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AC233279.1-201ENST00000455300 423 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RPL35AP28-201ENST00000459730 331 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RPS15AP36-201ENST00000492022 382 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RN7SL447P-201ENST00000494711 245 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXC12P31275 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC12P31275 MTCO3P9-201ENST00000506989 781 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 SNORA19.2-201ENST00000516013 114 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 SCARNA15.1-201ENST00000516384 125 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RN7SKP66-201ENST00000516681 231 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 SCARNA16.4-201ENST00000516956 187 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RNA5SP503-201ENST00000517047 117 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 AP005435.4-201ENST00000529514 284 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AP003385.6-201ENST00000531603 374 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AC137627.1-201ENST00000545761 289 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXC12P31275 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXC12P31275 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC12P31275 MIR4742-201ENST00000581069 85 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 AC132068.1-201ENST00000623805 459 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC12P31275 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXC12P31275 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 ABCC13-202ENST00000463099 3842 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AP001273.1-201ENST00000624493 3152 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXC12P31275 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 RNU6-179P-201ENST00000363350 107 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 U8.4-201ENST00000363626 134 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RNU5E-6P-201ENST00000365574 115 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 Y_RNA.419-201ENST00000384041 102 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 SNORD56.6-201ENST00000384569 71 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RNU6-754P-201ENST00000391166 107 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RNA5SP56-201ENST00000410277 118 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RNU2-29P-201ENST00000410423 189 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC096921.1-201ENST00000411661 375 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 AC114491.1-201ENST00000416095 246 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AL161631.1-201ENST00000417933 486 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AL645937.1-202ENST00000421799 937 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC018630.2-202ENST00000422992 927 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC092017.2-201ENST00000427600 362 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 ELOCP18-201ENST00000434209 337 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 OR6D1P-201ENST00000436165 939 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC005094.1-201ENST00000440420 368 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 AL590639.1-201ENST00000456484 337 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RNU6-329P-201ENST00000459618 107 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RN7SL222P-201ENST00000476452 299 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 TTC39CP1-201ENST00000512513 755 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RNU6-277P-201ENST00000516272 106 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 RN7SKP256-201ENST00000517201 314 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 IGLV3-24-201ENST00000517477 197 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC12P31275 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 AL442663.2-201ENST00000554385 511 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 SCOCP1-201ENST00000554676 349 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 NCAPGP2-201ENST00000557911 754 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 MIR4293-201ENST00000584305 78 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 AC010928.3-201ENST00000587712 541 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC12P31275 AL669831.4-202ENST00000590817 238 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms