Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MTCO3P35-201ENST00000485582 781 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA9P31269 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA9P31269 TXNP6-201ENST00000510190 310 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AP001207.1-201ENST00000524051 481 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 MTND2P26-201ENST00000528255 1029 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AC087276.1-201ENST00000529659 480 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXA9P31269 POLR2KP1-201ENST00000553226 168 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA9P31269 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA9P31269 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA9P31269 AL109653.1-201ENST00000603091 248 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AC026741.1-201ENST00000605892 482 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 OR2AS2P-201ENST00000606902 342 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AC120053.1-201ENST00000607706 736 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 AC068880.4-201ENST00000623082 495 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA9P31269 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXA9P31269 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXA9P31269 AP001350.1-201ENST00000601906 1524 ntBASIC3.19□□□□□ -1.9
HOXA9P31269 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HOXA9P31269 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA9P31269 SNORA63.3-201ENST00000362682 132 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HOXA9P31269 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA9P31269 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA9P31269 BTBD10P2-201ENST00000404779 676 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA9P31269 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXA9P31269 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.18□□□□□ -1.9
HOXA9P31269 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA9P31269 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AL513175.1-201ENST00000431492 780 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA9P31269 AC093156.1-201ENST00000440382 670 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 HSPE1P28-201ENST00000443139 211 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AL096829.2-201ENST00000446582 742 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 RPL7P59-201ENST00000447700 943 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 RPL7P55-201ENST00000450522 746 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA9P31269 RPS15AP1-201ENST00000457423 391 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AC108078.3-201ENST00000502633 489 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AC091826.1-201ENST00000514065 313 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA9P31269 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA9P31269 AP005205.1-201ENST00000563503 508 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AC245100.7-201ENST00000609678 442 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA9P31269 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA9P31269 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA9P31269 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA9P31269 AL365361.1-201ENST00000566942 3481 ntBASIC3.18□□□□□ -1.9
HOXA9P31269 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXA9P31269 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA9P31269 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXA9P31269 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA9P31269 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXA9P31269 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXA9P31269 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 RNA5SP27-201ENST00000363839 119 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 RNU6-1181P-201ENST00000384191 106 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 MIR1250-201ENST00000408098 113 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 RNA5SP129-201ENST00000410276 118 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 RNU2-21P-201ENST00000410368 188 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC011242.1-201ENST00000433596 1158 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AL158053.1-201ENST00000441503 453 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AL135938.1-201ENST00000443141 297 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC092685.1-201ENST00000447960 1243 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXA9P31269 NECAP1P2-201ENST00000455668 727 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 HMGN2P13-201ENST00000476476 274 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC114967.1-201ENST00000504890 259 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 GTF3AP2-201ENST00000557014 266 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC093510.2-201ENST00000562820 896 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
HOXA9P31269 AC016542.1-201ENST00000608259 493 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AL390240.1-201ENST00000612950 384 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 FRG1HP-204ENST00000617940 757 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC006249.1-201ENST00000621223 471 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 AC007998.5-201ENST00000622938 237 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 SAGE4P-201ENST00000442271 3381 ntBASIC3.17□□□□□ -1.9
HOXA9P31269 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms