Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP1P30622 MTCO3P11-201ENST00000455103 774 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 RPS20P22-201ENST00000473700 357 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 OR4R2P-201ENST00000530815 597 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 AC068446.3-201ENST00000555285 382 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 AC012182.1-201ENST00000570133 895 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 MIR3670-2-201ENST00000582974 65 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 MIR3670-1-201ENST00000584160 65 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 MIR3670-3-201ENST00000584855 65 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 NRBF2P1-201ENST00000587407 859 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 AC025754.2-201ENST00000606491 432 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 MIR3670-4-201ENST00000612260 65 ntBASIC3.55□□□□□ -1.84
CLIP1P30622 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP1P30622 RNU6-304P-201ENST00000364855 107 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 RNU1-138P-201ENST00000384093 164 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 SEPT7P6-201ENST00000469999 1143 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.54□□□□□ -1.84
CLIP1P30622 TRAV31-201ENST00000502780 342 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 AC107222.1-201ENST00000510899 637 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.54□□□□□ -1.84
CLIP1P30622 AC008126.1-201ENST00000549019 480 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.54□□□□□ -1.84
CLIP1P30622 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.54□□□□□ -1.84
CLIP1P30622 AC010297.1-201ENST00000623948 149 ntBASIC3.54□□□□□ -1.84
CLIP1P30622 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLIP1P30622 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.54□□□□□ -1.84
CLIP1P30622 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.54□□□□□ -1.84
CLIP1P30622 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.53□□□□□ -1.84
CLIP1P30622 RNU6-482P-201ENST00000391068 107 ntBASIC3.53□□□□□ -1.84
CLIP1P30622 NCSTNP1-201ENST00000406229 144 ntBASIC3.53□□□□□ -1.84
CLIP1P30622 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.53□□□□□ -1.84
CLIP1P30622 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.53□□□□□ -1.84
CLIP1P30622 TRBV26-201ENST00000456572 344 ntBASIC3.53□□□□□ -1.84
CLIP1P30622 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.53□□□□□ -1.84
CLIP1P30622 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.53□□□□□ -1.84
CLIP1P30622 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.53□□□□□ -1.84
CLIP1P30622 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.53□□□□□ -1.84
CLIP1P30622 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.53□□□□□ -1.84
CLIP1P30622 AC093591.3-201ENST00000634516 308 ntBASIC3.53□□□□□ -1.84
CLIP1P30622 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.53□□□□□ -1.84
CLIP1P30622 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLIP1P30622 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CLIP1P30622 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.53□□□□□ -1.85
CLIP1P30622 AC068587.2-201ENST00000478386 781 ntBASIC3.53□□□□□ -1.85
CLIP1P30622 SCARNA16.3-201ENST00000516595 184 ntBASIC3.53□□□□□ -1.85
CLIP1P30622 AC004486.1-201ENST00000546846 233 ntBASIC3.53□□□□□ -1.85
CLIP1P30622 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.53□□□□□ -1.85
CLIP1P30622 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.53□□□□□ -1.85
CLIP1P30622 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.53□□□□□ -1.85
CLIP1P30622 AC092447.7-201ENST00000422212 1621 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 SNORA64-201ENST00000384674 134 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 AC007390.1-201ENST00000415722 356 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 YWHAZP7-201ENST00000436906 631 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 AL603825.1-201ENST00000438481 80 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 RPS4XP6-201ENST00000477670 797 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP1P30622 RNU6-991P-201ENST00000516168 107 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 HSPE1P18-201ENST00000517602 280 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP1P30622 AL137847.3-201ENST00000611521 109 ntBASIC3.52□□□□□ -1.85
CLIP1P30622 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.52□□□□□ -1.85
CLIP1P30622 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.52□□□□□ -1.85
CLIP1P30622 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
CLIP1P30622 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP1P30622 RNU6-76P-201ENST00000384060 104 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 AL023284.1-201ENST00000403956 276 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP1P30622 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP1P30622 AC004263.1-201ENST00000479327 332 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 RNA5SP200-201ENST00000516360 103 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 RNU6-826P-201ENST00000516827 104 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.51□□□□□ -1.85
CLIP1P30622 AC022884.3-201ENST00000579571 248 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.51□□□□□ -1.85
CLIP1P30622 AC009977.1-201ENST00000586015 570 ntBASIC3.51□□□□□ -1.85
CLIP1P30622 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP1P30622 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP1P30622 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 SAR1AP2-201ENST00000392696 594 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP1P30622 Z98742.2-201ENST00000431564 187 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 MRPS33P4-201ENST00000434892 317 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP1P30622 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP1P30622 AC015712.3-201ENST00000559380 164 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP1P30622 AL451074.6-201ENST00000608512 729 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 CR589904.2-201ENST00000612533 440 ntBASIC3.5□□□□□ -1.85
CLIP1P30622 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.5□□□□□ -1.85
CLIP1P30622 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP1P30622 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP1P30622 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP1P30622 AL356575.1-201ENST00000603008 283 ntBASIC3.49□□□□□ -1.85
CLIP1P30622 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP1P30622 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP1P30622 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP1P30622 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP1P30622 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP1P30622 ZNF355P-201ENST00000427301 3216 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms