Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC1P29353 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC1P29353 ZNF833P-201ENST00000424938 1494 ntBASIC3.35□□□□□ -1.87
SHC1P29353 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHC1P29353 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SHC1P29353 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC1P29353 RNU4-75P-201ENST00000364621 146 ntBASIC3.35□□□□□ -1.87
SHC1P29353 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC1P29353 Y_RNA.505-201ENST00000384489 102 ntBASIC3.35□□□□□ -1.87
SHC1P29353 RNU6-920P-201ENST00000410926 92 ntBASIC3.35□□□□□ -1.87
SHC1P29353 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.35□□□□□ -1.87
SHC1P29353 AL159169.1-201ENST00000421119 127 ntBASIC3.35□□□□□ -1.87
SHC1P29353 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AL022400.1-201ENST00000423946 935 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 NDUFB1P1-201ENST00000435191 180 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 MTND1P34-201ENST00000438556 671 ntBASIC3.35□□□□□ -1.87
SHC1P29353 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 ACTG1P13-201ENST00000486987 1043 ntBASIC3.35□□□□□ -1.87
SHC1P29353 UBE2CP3-201ENST00000502715 450 ntBASIC3.35□□□□□ -1.87
SHC1P29353 MTND4P2-201ENST00000507767 1203 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 RNA5SP164-201ENST00000516533 110 ntBASIC3.35□□□□□ -1.87
SHC1P29353 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SHC1P29353 OR5AP1P-201ENST00000529730 940 ntBASIC3.35□□□□□ -1.87
SHC1P29353 PTP4A1P6-201ENST00000531034 478 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC1P29353 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 ACTR3BP3-201ENST00000565577 979 ntBASIC3.35□□□□□ -1.87
SHC1P29353 OR4K7P-201ENST00000580232 945 ntBASIC3.35□□□□□ -1.87
SHC1P29353 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 AC119751.7-201ENST00000600494 245 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 RN7SKP299-201ENST00000606679 301 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 AC103591.3-201ENST00000608684 209 ntBASIC3.35□□□□□ -1.87
SHC1P29353 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC1P29353 AC119674.1-207ENST00000641355 633 ntBASIC3.35□□□□□ -1.87
SHC1P29353 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC1P29353 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC1P29353 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
SHC1P29353 AC092104.1-201ENST00000497346 1441 ntBASIC3.35□□□□□ -1.87
SHC1P29353 AC005539.1-201ENST00000443768 1479 ntBASIC3.35□□□□□ -1.87
SHC1P29353 Z99496.1-201ENST00000469424 1477 ntBASIC3.35□□□□□ -1.87
SHC1P29353 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SHC1P29353 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC1P29353 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SHC1P29353 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 AC119744.1-201ENST00000454746 1715 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 RNU6-839P-201ENST00000363347 108 ntBASIC3.34□□□□□ -1.87
SHC1P29353 RNU6-621P-201ENST00000364752 109 ntBASIC3.34□□□□□ -1.87
SHC1P29353 RNU6-283P-201ENST00000364788 107 ntBASIC3.34□□□□□ -1.87
SHC1P29353 Y_RNA.311-201ENST00000365068 96 ntBASIC3.34□□□□□ -1.87
SHC1P29353 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.87
SHC1P29353 RNU6-1300P-201ENST00000391046 108 ntBASIC3.34□□□□□ -1.87
SHC1P29353 SNORA11-201ENST00000408789 128 ntBASIC3.34□□□□□ -1.87
SHC1P29353 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.34□□□□□ -1.87
SHC1P29353 Y_RNA.599-201ENST00000410489 109 ntBASIC3.34□□□□□ -1.87
SHC1P29353 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC1P29353 NPM1P11-201ENST00000417106 855 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 RPL31P45-201ENST00000419532 356 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC008065.1-201ENST00000428525 348 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AL050321.1-201ENST00000432363 400 ntBASIC3.34□□□□□ -1.87
SHC1P29353 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC1P29353 PNPLA4P1-201ENST00000458328 305 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
SHC1P29353 SETP11-201ENST00000473027 690 ntBASIC3.34□□□□□ -1.87
SHC1P29353 ACTR3P3-201ENST00000480448 893 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC068724.1-201ENST00000487100 792 ntBASIC3.34□□□□□ -1.87
SHC1P29353 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.87
SHC1P29353 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.34□□□□□ -1.87
SHC1P29353 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.34□□□□□ -1.87
SHC1P29353 AC048346.1-201ENST00000510247 144 ntBASIC3.34□□□□□ -1.87
SHC1P29353 LTV1P1-201ENST00000510683 1237 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms