Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.1□□□□□ -1.43
VARSP26640 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VARSP26640 OR1E3-201ENST00000575608 948 ntBASIC6.1□□□□□ -1.43
VARSP26640 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 AC093227.2-201ENST00000589357 285 ntBASIC6.1□□□□□ -1.43
VARSP26640 AL138895.2-201ENST00000603019 178 ntBASIC6.1□□□□□ -1.43
VARSP26640 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.1□□□□□ -1.43
VARSP26640 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.1□□□□□ -1.43
VARSP26640 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.1□□□□□ -1.43
VARSP26640 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARSP26640 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.1□□□□□ -1.43
VARSP26640 AC092692.1-201ENST00000623625 2595 ntBASIC6.1□□□□□ -1.43
VARSP26640 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
VARSP26640 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 DNM1P47-203ENST00000571780 12667 ntBASIC6.09□□□□□ -1.43
VARSP26640 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.09□□□□□ -1.43
VARSP26640 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VARSP26640 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VARSP26640 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
VARSP26640 AL391987.6-201ENST00000305671 199 ntBASIC6.09□□□□□ -1.43
VARSP26640 MIR133A2-201ENST00000347538 102 ntBASIC6.09□□□□□ -1.43
VARSP26640 Y_RNA.84-201ENST00000363011 104 ntBASIC6.09□□□□□ -1.43
VARSP26640 SNORD50B-201ENST00000364995 70 ntBASIC6.09□□□□□ -1.43
VARSP26640 RNU6-1293P-201ENST00000384077 107 ntBASIC6.09□□□□□ -1.43
VARSP26640 MIR188-201ENST00000385034 86 ntBASIC6.09□□□□□ -1.43
VARSP26640 AL603910.2-201ENST00000407268 136 ntBASIC6.09□□□□□ -1.43
VARSP26640 RPL21P50-201ENST00000417698 477 ntBASIC6.09□□□□□ -1.43
VARSP26640 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.09□□□□□ -1.43
VARSP26640 AC108479.1-201ENST00000431142 427 ntBASIC6.09□□□□□ -1.43
VARSP26640 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.09□□□□□ -1.43
VARSP26640 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.09□□□□□ -1.43
VARSP26640 PPIAP10-201ENST00000438675 458 ntBASIC6.09□□□□□ -1.43
VARSP26640 AL354710.1-201ENST00000453641 246 ntBASIC6.09□□□□□ -1.43
VARSP26640 VPS25P1-201ENST00000455691 508 ntBASIC6.09□□□□□ -1.43
VARSP26640 AP000926.1-201ENST00000479573 241 ntBASIC6.09□□□□□ -1.43
VARSP26640 AC114728.1-201ENST00000488289 483 ntBASIC6.09□□□□□ -1.43
VARSP26640 AC110792.1-201ENST00000491826 472 ntBASIC6.09□□□□□ -1.43
VARSP26640 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.09□□□□□ -1.43
VARSP26640 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.09□□□□□ -1.43
VARSP26640 RN7SL802P-201ENST00000577858 299 ntBASIC6.09□□□□□ -1.43
VARSP26640 ELOCP5-201ENST00000604924 333 ntBASIC6.09□□□□□ -1.43
VARSP26640 RNU6-156P-201ENST00000621869 107 ntBASIC6.09□□□□□ -1.43
VARSP26640 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.09□□□□□ -1.43
VARSP26640 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.09□□□□□ -1.43
VARSP26640 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VARSP26640 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.09□□□□□ -1.44
VARSP26640 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
VARSP26640 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
VARSP26640 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VARSP26640 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.08□□□□□ -1.44
VARSP26640 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.08□□□□□ -1.44
VARSP26640 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 MIR335-201ENST00000362173 94 ntBASIC6.08□□□□□ -1.44
VARSP26640 RNU1-146P-201ENST00000364015 165 ntBASIC6.08□□□□□ -1.44
VARSP26640 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 MIR625-201ENST00000385047 85 ntBASIC6.08□□□□□ -1.44
VARSP26640 RNU6-493P-201ENST00000391321 108 ntBASIC6.08□□□□□ -1.44
VARSP26640 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.08□□□□□ -1.44
VARSP26640 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.08□□□□□ -1.44
VARSP26640 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.08□□□□□ -1.44
VARSP26640 OSTCP4-201ENST00000424397 449 ntBASIC6.08□□□□□ -1.44
VARSP26640 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.08□□□□□ -1.44
VARSP26640 RPSAP65-201ENST00000429660 595 ntBASIC6.08□□□□□ -1.44
VARSP26640 OR3D1P-201ENST00000438288 955 ntBASIC6.08□□□□□ -1.44
VARSP26640 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.08□□□□□ -1.44
VARSP26640 RPS27AP3-201ENST00000453803 454 ntBASIC6.08□□□□□ -1.44
VARSP26640 AP000942.1-201ENST00000463969 747 ntBASIC6.08□□□□□ -1.44
VARSP26640 RN7SL369P-201ENST00000477138 299 ntBASIC6.08□□□□□ -1.44
VARSP26640 RPL21P103-201ENST00000479921 488 ntBASIC6.08□□□□□ -1.44
VARSP26640 AC011411.1-201ENST00000509592 876 ntBASIC6.08□□□□□ -1.44
VARSP26640 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.08□□□□□ -1.44
VARSP26640 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.08□□□□□ -1.44
VARSP26640 RNA5SP206-201ENST00000516703 121 ntBASIC6.08□□□□□ -1.44
VARSP26640 RNA5SP441-201ENST00000516809 88 ntBASIC6.08□□□□□ -1.44
VARSP26640 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.08□□□□□ -1.44
VARSP26640 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.08□□□□□ -1.44
VARSP26640 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.08□□□□□ -1.44
VARSP26640 AC063949.1-201ENST00000552900 865 ntBASIC6.08□□□□□ -1.44
VARSP26640 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.08□□□□□ -1.44
VARSP26640 MIR3189-201ENST00000578735 73 ntBASIC6.08□□□□□ -1.44
VARSP26640 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.08□□□□□ -1.44
VARSP26640 AL670379.6-201ENST00000603753 252 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms