Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF4P23510 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF4P23510 DEFB108F-201ENST00000344638 222 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 SNORA23-201ENST00000365128 182 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 RNY3P13-201ENST00000365542 102 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AL109941.1-201ENST00000401925 229 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 RPS15AP12-201ENST00000419498 388 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AC093414.1-201ENST00000434712 514 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 RPL26P6-201ENST00000440913 438 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AL356981.1-201ENST00000454879 684 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 RPS5P7-201ENST00000456664 608 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 RPS17P2-201ENST00000461663 408 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF4P23510 AK3P4-201ENST00000504283 583 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 MRPS33P2-201ENST00000507850 322 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
TNFSF4P23510 ENPP7P9-201ENST00000514456 627 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 RN7SKP46-201ENST00000515942 234 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AP003392.2-201ENST00000527269 208 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AC133555.2-201ENST00000550213 292 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 MED28P6-201ENST00000558776 231 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC009117.1-201ENST00000563948 554 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 MTND1P15-201ENST00000579262 949 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC006116.10-201ENST00000591836 581 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC078795.2-201ENST00000602835 1252 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC073648.5-201ENST00000603502 305 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AL031320.1-201ENST00000604177 357 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 Z99129.1-201ENST00000612510 255 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AC008121.2-201ENST00000614647 523 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 AC004825.2-201ENST00000616634 455 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF4P23510 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF4P23510 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TNFSF4P23510 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF4P23510 AL359922.3-201ENST00000624779 1670 ntBASIC4.13□□□□□ -1.75
TNFSF4P23510 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.13□□□□□ -1.75
TNFSF4P23510 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.13□□□□□ -1.75
TNFSF4P23510 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
TNFSF4P23510 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TNFSF4P23510 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
TNFSF4P23510 AC067945.1-201ENST00000342609 618 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 SNORA58B-201ENST00000364259 136 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RPL7P60-201ENST00000397636 735 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFSF4P23510 AL357515.1-201ENST00000402967 542 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RN7SKP16-201ENST00000410180 299 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RN7SKP159-201ENST00000410657 292 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.12□□□□□ -1.75
TNFSF4P23510 EIF1P3-201ENST00000423841 334 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 USP9YP14-201ENST00000430663 563 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RPS17P8-201ENST00000434525 335 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 PSMD10P3-201ENST00000437000 448 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 AC005094.1-201ENST00000440420 368 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 USP9YP15-201ENST00000442391 422 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 MTCO3P45-201ENST00000443036 613 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RPL7AP61-201ENST00000443410 636 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFSF4P23510 AL136380.1-201ENST00000447970 162 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFSF4P23510 AURKAPS2-201ENST00000454983 333 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFSF4P23510 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.12□□□□□ -1.75
TNFSF4P23510 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.12□□□□□ -1.75
TNFSF4P23510 AC092451.1-201ENST00000480211 153 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.12□□□□□ -1.75
TNFSF4P23510 AC110775.1-201ENST00000513721 462 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.12□□□□□ -1.75
TNFSF4P23510 RNA5SP249-201ENST00000516127 99 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RNA5SP468-201ENST00000516782 93 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 SNORA31.22-201ENST00000517204 135 ntBASIC4.12□□□□□ -1.75
TNFSF4P23510 RNU6-709P-201ENST00000517257 104 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms