Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.82□□□□□ -1.96
USF1P22415 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USF1P22415 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.82□□□□□ -1.96
USF1P22415 MTCO1P40-201ENST00000574371 625 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.82□□□□□ -1.96
USF1P22415 AL162713.1-201ENST00000604480 262 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC128687.1-201ENST00000605304 619 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC092650.2-201ENST00000619984 902 ntBASIC2.82□□□□□ -1.96
USF1P22415 AL136164.4-201ENST00000625013 2135 ntBASIC2.82□□□□□ -1.96
USF1P22415 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USF1P22415 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USF1P22415 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
USF1P22415 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
USF1P22415 MTND5P27-201ENST00000428871 1720 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.81□□□□□ -1.96
USF1P22415 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USF1P22415 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USF1P22415 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
USF1P22415 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USF1P22415 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USF1P22415 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
USF1P22415 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
USF1P22415 RNU6-821P-201ENST00000390995 107 ntBASIC2.81□□□□□ -1.96
USF1P22415 UBA52P6-201ENST00000399822 382 ntBASIC2.81□□□□□ -1.96
USF1P22415 MTCO2P31-201ENST00000402702 684 ntBASIC2.81□□□□□ -1.96
USF1P22415 AL023807.1-201ENST00000407932 359 ntBASIC2.81□□□□□ -1.96
USF1P22415 PTGES3P2-201ENST00000407942 482 ntBASIC2.81□□□□□ -1.96
USF1P22415 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 HMGN1P24-201ENST00000412282 298 ntBASIC2.81□□□□□ -1.96
USF1P22415 RPL7P46-201ENST00000425129 740 ntBASIC2.81□□□□□ -1.96
USF1P22415 RPS6P14-201ENST00000425165 719 ntBASIC2.81□□□□□ -1.96
USF1P22415 DEFB130D-201ENST00000426866 237 ntBASIC2.81□□□□□ -1.96
USF1P22415 DPPA2P1-201ENST00000428060 556 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.81□□□□□ -1.96
USF1P22415 BX679664.1-201ENST00000434429 253 ntBASIC2.81□□□□□ -1.96
USF1P22415 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 HIGD1AP11-201ENST00000438361 280 ntBASIC2.81□□□□□ -1.96
USF1P22415 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.81□□□□□ -1.96
USF1P22415 OR51B8P-201ENST00000449892 769 ntBASIC2.81□□□□□ -1.96
USF1P22415 TRBV26-201ENST00000456572 344 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.81□□□□□ -1.96
USF1P22415 snoU13.4-201ENST00000458916 104 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC091179.1-201ENST00000461606 579 ntBASIC2.81□□□□□ -1.96
USF1P22415 AP001486.1-201ENST00000463339 476 ntBASIC2.81□□□□□ -1.96
USF1P22415 RPL27AP5-201ENST00000469428 449 ntBASIC2.81□□□□□ -1.96
USF1P22415 RPL7P5-201ENST00000471472 736 ntBASIC2.81□□□□□ -1.96
USF1P22415 RN7SL442P-201ENST00000473804 320 ntBASIC2.81□□□□□ -1.96
USF1P22415 RPS3AP43-201ENST00000479743 781 ntBASIC2.81□□□□□ -1.96
USF1P22415 RPL21P13-201ENST00000488305 481 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC118282.2-201ENST00000508739 374 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC004062.1-201ENST00000509926 645 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC119751.5-201ENST00000514077 770 ntBASIC2.81□□□□□ -1.96
USF1P22415 FABP5P12-201ENST00000515543 389 ntBASIC2.81□□□□□ -1.96
USF1P22415 RNA5SP380-201ENST00000517190 98 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC107934.2-201ENST00000518653 310 ntBASIC2.81□□□□□ -1.96
USF1P22415 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.81□□□□□ -1.96
USF1P22415 AP000790.1-201ENST00000528891 737 ntBASIC2.81□□□□□ -1.96
USF1P22415 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.81□□□□□ -1.96
USF1P22415 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.81□□□□□ -1.96
USF1P22415 XIAPP1-201ENST00000603162 600 ntBASIC2.81□□□□□ -1.96
USF1P22415 AC026741.1-201ENST00000605892 482 ntBASIC2.81□□□□□ -1.96
USF1P22415 AL451074.6-201ENST00000608512 729 ntBASIC2.81□□□□□ -1.96
USF1P22415 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.81□□□□□ -1.96
USF1P22415 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.81□□□□□ -1.96
USF1P22415 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.81□□□□□ -1.96
USF1P22415 AC017071.1-201ENST00000564407 2204 ntBASIC2.8□□□□□ -1.96
USF1P22415 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USF1P22415 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.8□□□□□ -1.96
USF1P22415 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.8□□□□□ -1.96
USF1P22415 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USF1P22415 RNU1-75P-201ENST00000347264 129 ntBASIC2.8□□□□□ -1.96
USF1P22415 RNU6-115P-201ENST00000364310 107 ntBASIC2.8□□□□□ -1.96
USF1P22415 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.8□□□□□ -1.96
USF1P22415 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
USF1P22415 AP002088.1-201ENST00000382740 395 ntBASIC2.8□□□□□ -1.96
USF1P22415 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
USF1P22415 GSTA8P-201ENST00000404253 637 ntBASIC2.8□□□□□ -1.96
USF1P22415 RNU4-65P-201ENST00000410473 140 ntBASIC2.8□□□□□ -1.96
USF1P22415 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 BOLA3P4-201ENST00000418151 400 ntBASIC2.8□□□□□ -1.96
USF1P22415 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.8□□□□□ -1.96
USF1P22415 AL035410.1-201ENST00000427409 427 ntBASIC2.8□□□□□ -1.96
USF1P22415 RPL23AP82-202ENST00000427528 469 ntBASIC2.8□□□□□ -1.96
USF1P22415 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.8□□□□□ -1.96
USF1P22415 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.8□□□□□ -1.96
USF1P22415 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC234064.1-201ENST00000436312 247 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 AC127537.2-201ENST00000439258 465 ntBASIC2.8□□□□□ -1.96
USF1P22415 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.8□□□□□ -1.96
USF1P22415 SSXP4-201ENST00000451349 245 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC097262.1-201ENST00000452559 548 ntBASIC2.8□□□□□ -1.96
USF1P22415 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.8□□□□□ -1.96
USF1P22415 RNU7-140P-201ENST00000459546 60 ntBASIC2.8□□□□□ -1.96
USF1P22415 RPS27P29-201ENST00000463110 252 ntBASIC2.8□□□□□ -1.96
USF1P22415 RPL32P14-201ENST00000463196 378 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms