Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP2AP11388 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.8□□□□□ -1.8
TOP2AP11388 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP2AP11388 AC245517.5-201ENST00000611529 162 ntBASIC3.8□□□□□ -1.8
TOP2AP11388 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.8□□□□□ -1.8
TOP2AP11388 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TOP2AP11388 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TOP2AP11388 SNORA80E-201ENST00000384744 137 ntBASIC3.8□□□□□ -1.8
TOP2AP11388 AC093151.1-201ENST00000427711 313 ntBASIC3.8□□□□□ -1.8
TOP2AP11388 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.8□□□□□ -1.8
TOP2AP11388 FAM92A1P2-202ENST00000504766 877 ntBASIC3.8□□□□□ -1.8
TOP2AP11388 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP2AP11388 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP2AP11388 AP004247.3-201ENST00000608682 624 ntBASIC3.8□□□□□ -1.8
TOP2AP11388 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP2AP11388 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TOP2AP11388 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
TOP2AP11388 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP2AP11388 AL121882.1-201ENST00000422893 417 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 SEPT7P6-201ENST00000469999 1143 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP2AP11388 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP2AP11388 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP2AP11388 AL160237.3-201ENST00000604114 1013 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 AL022099.1-201ENST00000604551 712 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 VN1R7P-201ENST00000619242 903 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 MIR6132-201ENST00000622083 109 ntBASIC3.79□□□□□ -1.8
TOP2AP11388 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TOP2AP11388 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.78□□□□□ -1.8
TOP2AP11388 CCNHP1-201ENST00000513311 678 ntBASIC3.78□□□□□ -1.8
TOP2AP11388 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP2AP11388 CBX3P5-201ENST00000552017 521 ntBASIC3.78□□□□□ -1.8
TOP2AP11388 AL389895.1-201ENST00000554127 252 ntBASIC3.78□□□□□ -1.8
TOP2AP11388 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.78□□□□□ -1.8
TOP2AP11388 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.78□□□□□ -1.8
TOP2AP11388 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TOP2AP11388 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TOP2AP11388 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
TOP2AP11388 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TOP2AP11388 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
TOP2AP11388 SNORA48.3-201ENST00000391081 134 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 MORF4L1P6-201ENST00000418771 268 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 RPL23AP42-201ENST00000471152 471 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 RNU6-295P-201ENST00000516901 104 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 AC107918.3-201ENST00000533272 382 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 MTCO3P13-201ENST00000577757 781 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 CU459211.1-201ENST00000635667 749 ntBASIC3.77□□□□□ -1.81
TOP2AP11388 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TOP2AP11388 MTND5P28-201ENST00000438005 1594 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 SNORA25.6-201ENST00000364121 118 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 TRBV26-201ENST00000456572 344 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.76□□□□□ -1.81
TOP2AP11388 AC023043.3-201ENST00000593113 385 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 CYP3A51P-201ENST00000633513 256 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 AC084035.1-201ENST00000634543 607 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.76□□□□□ -1.81
TOP2AP11388 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
TOP2AP11388 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.76□□□□□ -1.81
TOP2AP11388 AC011460.1-201ENST00000636268 1834 ntBASIC3.76□□□□□ -1.81
TOP2AP11388 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TOP2AP11388 AL161781.1-201ENST00000354277 403 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AC007677.1-201ENST00000445757 515 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 GAPDHP27-201ENST00000447427 1020 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AL118520.1-201ENST00000450770 291 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.75□□□□□ -1.81
TOP2AP11388 RN7SL499P-201ENST00000481141 276 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.75□□□□□ -1.81
TOP2AP11388 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.75□□□□□ -1.81
TOP2AP11388 AC068339.2-201ENST00000534395 618 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TOP2AP11388 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TOP2AP11388 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TOP2AP11388 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TOP2AP11388 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TOP2AP11388 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.75□□□□□ -1.81
TOP2AP11388 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TOP2AP11388 RNU1-138P-201ENST00000384093 164 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TOP2AP11388 AC012498.1-201ENST00000424037 437 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.75□□□□□ -1.81
TOP2AP11388 RN7SKP219-201ENST00000516825 296 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AL358913.1-201ENST00000554342 121 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.75□□□□□ -1.81
TOP2AP11388 AP000942.3-201ENST00000603702 160 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 LRRC77P-213ENST00000637727 880 ntBASIC3.75□□□□□ -1.81
TOP2AP11388 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TOP2AP11388 AL161431.1-201ENST00000618966 4205 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 AC025125.1-201ENST00000624743 1922 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TOP2AP11388 DEFA7P-201ENST00000382676 285 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 NDUFB4P5-201ENST00000415445 361 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 AL445646.1-201ENST00000431784 216 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 HMGB1P48-201ENST00000446155 598 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 OR4R2P-201ENST00000530815 597 ntBASIC3.74□□□□□ -1.81
TOP2AP11388 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms