Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNRPA1P09661 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.98□□□□□ -1.61
SNRPA1P09661 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SNRPA1P09661 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SNRPA1P09661 RNA5SP119-201ENST00000362715 117 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNRPA1P09661 RNU6-657P-201ENST00000383904 107 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 MIR199A2-201ENST00000385289 110 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 RPL21P17-201ENST00000397467 475 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 RPL17P12-201ENST00000413391 526 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC109780.2-201ENST00000413467 845 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 SYF2P2-201ENST00000417620 583 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.98□□□□□ -1.61
SNRPA1P09661 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 HMGB1P37-201ENST00000439613 609 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 MTATP6P23-201ENST00000440153 476 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AL353572.1-201ENST00000442490 417 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 NANOGNBP1-201ENST00000448444 480 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.98□□□□□ -1.61
SNRPA1P09661 APOOP2-201ENST00000461561 539 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 RPL21P71-201ENST00000465598 459 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AP000797.1-201ENST00000478870 387 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 UBE2CP3-201ENST00000502715 450 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC138853.1-201ENST00000503549 823 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 OR4A12P-201ENST00000530847 918 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AC136618.2-201ENST00000575091 400 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.98□□□□□ -1.61
SNRPA1P09661 PSMA6P4-201ENST00000603247 718 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 RNU6-88P-201ENST00000606801 100 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AP001521.1-201ENST00000609150 300 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC007684.1-201ENST00000609671 477 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AC231657.1-201ENST00000624313 397 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AC116563.2-201ENST00000624751 535 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AL773545.4-201ENST00000637262 310 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 AL513478.4-201ENST00000641636 310 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SNRPA1P09661 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNRPA1P09661 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SNRPA1P09661 AC027290.2-201ENST00000623210 18662 ntBASIC4.98□□□□□ -1.61
SNRPA1P09661 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNRPA1P09661 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SNRPA1P09661 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.98□□□□□ -1.61
SNRPA1P09661 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC011155.1-201ENST00000316512 456 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 SNRPEP3-201ENST00000338402 276 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 RNU6-1283P-201ENST00000365314 105 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC019155.1-201ENST00000382242 574 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 RNU6-146P-201ENST00000384602 108 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNRPA1P09661 MTCO3P31-201ENST00000405526 789 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 ZNF603P-201ENST00000405613 487 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 RNU2-65P-201ENST00000410162 185 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 RN7SKP56-201ENST00000410513 331 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC073136.2-201ENST00000417282 849 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 RPL21P32-201ENST00000419877 477 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AL139247.1-201ENST00000422768 325 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
SNRPA1P09661 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC091286.1-201ENST00000431233 461 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AL139415.2-201ENST00000431968 163 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC010881.1-201ENST00000433830 235 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 TRGVB-201ENST00000453257 471 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC109464.2-201ENST00000510242 943 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC006499.6-201ENST00000511169 607 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC007991.1-201ENST00000522680 631 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC005771.1-201ENST00000585581 349 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AC098614.4-201ENST00000607601 462 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 AC027807.2-201ENST00000616099 408 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 AL034408.1-202ENST00000636088 415 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SNRPA1P09661 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNRPA1P09661 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.97□□□□□ -1.61
SNRPA1P09661 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.97□□□□□ -1.61
SNRPA1P09661 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms