Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFAP04085 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFAP04085 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFAP04085 AC109780.1-201ENST00000451768 1344 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFAP04085 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PDGFAP04085 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDGFAP04085 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 AL583834.1-201ENST00000406943 343 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFAP04085 MRPL53P1-201ENST00000414323 319 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFAP04085 E2F6P2-201ENST00000420708 748 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFAP04085 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFAP04085 CYCSP43-201ENST00000438233 310 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 CYCSP24-201ENST00000445119 316 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFAP04085 RN7SL184P-201ENST00000488308 297 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFAP04085 AP001086.1-201ENST00000494882 321 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.48□□□□□ -1.53
PDGFAP04085 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 RNU6-390P-201ENST00000516259 103 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 RNU1-54P-201ENST00000517181 120 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 DYNLL1P4-201ENST00000549314 266 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFAP04085 MIR3189-201ENST00000578735 73 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFAP04085 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFAP04085 AC005014.2-201ENST00000607795 599 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AC011890.2-201ENST00000613393 294 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 AP001005.3-201ENST00000622049 129 ntBASIC5.48□□□□□ -1.53
PDGFAP04085 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFAP04085 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PDGFAP04085 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFAP04085 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFAP04085 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDGFAP04085 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PDGFAP04085 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 Y_RNA.149-201ENST00000363558 117 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 U3.7-201ENST00000363668 216 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 RNU6-890P-201ENST00000384121 107 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 RNU6-190P-201ENST00000384154 102 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC016739.1-201ENST00000405359 345 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 SPTLC1P2-201ENST00000407089 121 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 MIR1302-3-201ENST00000408128 138 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 MIR548F4-201ENST00000408515 105 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.47□□□□□ -1.53
PDGFAP04085 BMS1P17-202ENST00000416720 316 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.47□□□□□ -1.53
PDGFAP04085 CYP4F30P-202ENST00000420048 405 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC099677.1-201ENST00000420575 175 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFAP04085 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.47□□□□□ -1.53
PDGFAP04085 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFAP04085 AL591704.1-201ENST00000432574 275 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AL160004.2-201ENST00000432935 350 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AL161722.2-201ENST00000434731 981 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC002553.2-201ENST00000453217 340 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 AL133445.1-201ENST00000467051 452 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC093270.2-201ENST00000486157 792 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.47□□□□□ -1.53
PDGFAP04085 RNU6-764P-201ENST00000516396 105 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 SNORA43.3-201ENST00000517240 103 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 HMGN2P36-201ENST00000529541 409 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.47□□□□□ -1.53
PDGFAP04085 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFAP04085 MTCO3P23-201ENST00000561363 289 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 RN7SL544P-201ENST00000617232 284 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 AL713922.2-201ENST00000619384 716 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
PDGFAP04085 RN7SL763P-201ENST00000620922 284 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC243312.2-201ENST00000623340 601 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC138965.3-201ENST00000623875 498 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFAP04085 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms