Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 SNORA48.10-201ENST00000516965 160 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 MIR2116-201ENST00000517221 80 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 PDCL2P2-201ENST00000533651 189 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC005832.3-201ENST00000537929 631 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.35□□□□□ -1.87
MT-ND1P03886 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.35□□□□□ -1.87
MT-ND1P03886 NBEAP1-201ENST00000554452 979 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.35□□□□□ -1.87
MT-ND1P03886 BNIP3P26-201ENST00000600827 554 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC083809.1-201ENST00000615051 472 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 AC009318.4-201ENST00000620496 486 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 AC019226.2-201ENST00000625973 424 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.35□□□□□ -1.87
MT-ND1P03886 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
MT-ND1P03886 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
MT-ND1P03886 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MT-ND1P03886 MTND4P34-201ENST00000572715 1371 ntBASIC3.35□□□□□ -1.87
MT-ND1P03886 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.87
MT-ND1P03886 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
MT-ND1P03886 RNU5D-1-201ENST00000363299 116 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 TAS2R15P-201ENST00000390674 928 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 PPIAP31-201ENST00000405422 495 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MT-ND1P03886 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AL591419.1-201ENST00000427423 339 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.34□□□□□ -1.87
MT-ND1P03886 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AL590103.1-201ENST00000434488 307 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
MT-ND1P03886 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 SETP5-201ENST00000437270 562 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC010655.1-201ENST00000449336 292 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MT-ND1P03886 RPL21P134-201ENST00000453468 483 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 RPS20P24-201ENST00000457473 361 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 PNPLA4P1-201ENST00000458328 305 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 MTCO2P6-201ENST00000463134 685 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 PABPC1P3-201ENST00000469174 459 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 RPS4XP22-201ENST00000480755 780 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AL139099.1-201ENST00000497398 403 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC104090.1-201ENST00000506341 1171 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC021146.8-201ENST00000507455 733 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC004062.1-201ENST00000509926 645 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC116353.3-201ENST00000511215 249 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.34□□□□□ -1.87
MT-ND1P03886 RNU5A-4P-201ENST00000516588 111 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 RNA5SP468-201ENST00000516782 93 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC138915.2-201ENST00000569776 97 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AC008507.1-201ENST00000587506 734 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AL139344.1-201ENST00000605228 195 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AL451074.6-201ENST00000608512 729 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC006329.2-201ENST00000611491 394 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC005344.1-201ENST00000613391 459 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.34□□□□□ -1.87
MT-ND1P03886 AL354798.1-201ENST00000622505 329 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AL732618.1-201ENST00000623251 301 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AC017037.3-201ENST00000625016 472 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 RNA5SP196-201ENST00000625967 102 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 MKKS-204ENST00000639674 192 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 AL513302.2-201ENST00000562313 1842 ntBASIC3.34□□□□□ -1.87
MT-ND1P03886 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
MT-ND1P03886 AP004289.2-201ENST00000444413 1457 ntBASIC3.34□□□□□ -1.88
MT-ND1P03886 AC244517.1-201ENST00000606030 2086 ntBASIC3.34□□□□□ -1.88
MT-ND1P03886 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
MT-ND1P03886 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MT-ND1P03886 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MT-ND1P03886 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
MT-ND1P03886 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
MT-ND1P03886 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MT-ND1P03886 SNORD82-201ENST00000365530 70 ntBASIC3.33□□□□□ -1.88
MT-ND1P03886 DEFB109C-201ENST00000382575 264 ntBASIC3.33□□□□□ -1.88
MT-ND1P03886 DEFB109B-201ENST00000382656 264 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms