Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL158825.1-201ENST00000414735 521 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.13□□□□□ -2.07
SPTA1P02549 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.13□□□□□ -2.07
SPTA1P02549 AC097714.1-201ENST00000511272 1647 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 AC007342.7-201ENST00000624610 2337 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.13□□□□□ -2.07
SPTA1P02549 OR11H5P-202ENST00000641612 1325 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SPTA1P02549 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 AL512633.1-201ENST00000399931 655 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 RHEBP3-201ENST00000411920 351 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.12□□□□□ -2.07
SPTA1P02549 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SPTA1P02549 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
SPTA1P02549 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SPTA1P02549 SNORA68.2-201ENST00000391263 128 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SPTA1P02549 HMGB3P23-201ENST00000414981 585 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.12□□□□□ -2.07
SPTA1P02549 BTF3P4-201ENST00000418852 495 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 AC016687.1-201ENST00000482574 353 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.12□□□□□ -2.07
SPTA1P02549 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.12□□□□□ -2.07
SPTA1P02549 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SPTA1P02549 RAC1P5-201ENST00000512182 576 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.12□□□□□ -2.07
SPTA1P02549 AC010620.2-201ENST00000600135 313 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 MIR6504-201ENST00000613520 61 ntBASIC2.12□□□□□ -2.07
SPTA1P02549 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SPTA1P02549 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTA1P02549 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SPTA1P02549 RNU6-805P-201ENST00000365643 106 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AL583834.1-201ENST00000406943 343 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.11□□□□□ -2.07
SPTA1P02549 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTA1P02549 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTA1P02549 MLLT10P2-201ENST00000506434 249 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 HMGB1P1-201ENST00000522557 636 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.11□□□□□ -2.07
SPTA1P02549 AC008083.2-201ENST00000546707 476 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AL731537.2-201ENST00000561565 951 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AC018690.1-201ENST00000608144 626 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.11□□□□□ -2.07
SPTA1P02549 PROS2P-201ENST00000474651 1951 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 RNU1-87P-201ENST00000363727 170 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 RNU1-100P-201ENST00000365255 165 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AL591416.1-201ENST00000404015 867 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AP000275.1-201ENST00000411943 390 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 PTP4A1P7-201ENST00000423476 514 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTA1P02549 AC013410.1-201ENST00000436223 1232 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 COX6CP2-201ENST00000444980 225 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AC107398.1-201ENST00000486904 505 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTA1P02549 OR4A45P-201ENST00000529954 901 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 PDCL2P2-201ENST00000533651 189 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTA1P02549 AC123904.3-201ENST00000547218 814 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.11□□□□□ -2.07
SPTA1P02549 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 AC078899.5-201ENST00000612475 178 ntBASIC2.11□□□□□ -2.07
SPTA1P02549 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPTA1P02549 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SPTA1P02549 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTA1P02549 Y_RNA.36-201ENST00000362602 112 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTA1P02549 RNU4-62P-201ENST00000410125 130 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 SPA17P1-201ENST00000416656 452 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 MRPL50P4-201ENST00000446432 475 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AL163540.1-201ENST00000485382 386 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AC021146.8-201ENST00000507455 733 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 SNORA9.3-201ENST00000516383 129 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 OR5D17P-201ENST00000531492 978 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTA1P02549 AC015911.5-201ENST00000587076 451 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SPTA1P02549 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SPTA1P02549 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTA1P02549 AC138915.3-201ENST00000562908 1389 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTA1P02549 AC069528.2-201ENST00000624849 1991 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 Z99496.1-201ENST00000469424 1477 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 Y_RNA.224-201ENST00000364308 111 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTA1P02549 AL445213.1-201ENST00000412589 747 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTA1P02549 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.1□□□□□ -2.07
SPTA1P02549 AC034244.2-201ENST00000514668 858 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.1□□□□□ -2.07
SPTA1P02549 RPS3AP4-201ENST00000555161 764 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms