Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CNOT4O95628 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 PABPC1P7-201ENST00000413177 1513 ntBASIC4.7□□□□□ -1.66
CNOT4O95628 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNOT4O95628 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
CNOT4O95628 PNPT1P2-201ENST00000456768 2050 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 KPNA2P2-201ENST00000419546 1489 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 AC007390.2-201ENST00000606229 3803 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC092125.1-201ENST00000562568 1995 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC002525.1-201ENST00000624392 1622 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 RIOK3P1-201ENST00000418778 1528 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 RPL7P26-201ENST00000333817 754 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 SNORA17.1-201ENST00000362945 126 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 RNU6-1097P-201ENST00000363586 107 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 RN7SKP44-201ENST00000363602 316 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 SNORA32.2-201ENST00000384049 122 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 Y_RNA.474-201ENST00000384341 102 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 MIR606-201ENST00000384851 96 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 RPL32P23-201ENST00000397237 405 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 EIF5P1-201ENST00000400019 1231 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 MTND3P8-201ENST00000412909 339 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AL807761.1-201ENST00000417622 171 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 FTH1P6-201ENST00000430768 320 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 GPR143P-201ENST00000434155 205 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT4O95628 RPS15AP9-201ENST00000439856 381 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 BRK1P2-201ENST00000442875 223 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC104073.1-201ENST00000451988 151 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 Z92846.1-201ENST00000456203 268 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 Y_RNA.632-201ENST00000459189 102 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 PABPC1P3-201ENST00000469174 459 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT4O95628 SNRPCP2-201ENST00000504370 475 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC112206.3-201ENST00000514578 389 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT4O95628 BTF3P12-201ENST00000519620 469 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC022616.3-201ENST00000523940 148 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 RPL10P14-201ENST00000565265 298 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.69□□□□□ -1.66
CNOT4O95628 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC009597.2-201ENST00000604659 592 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 Z84480.1-201ENST00000605131 311 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC116312.1-201ENST00000606841 314 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC090948.1-201ENST00000607464 549 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AL133215.3-201ENST00000609801 448 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AC093913.1-201ENST00000614178 329 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC068831.8-201ENST00000620171 435 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AP002799.1-201ENST00000623552 423 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.69□□□□□ -1.66
CNOT4O95628 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.69□□□□□ -1.66
CNOT4O95628 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 AC073136.1-201ENST00000449426 2884 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CNOT4O95628 MTCO1P24-201ENST00000515438 1558 ntBASIC4.69□□□□□ -1.66
CNOT4O95628 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNOT4O95628 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.68□□□□□ -1.66
CNOT4O95628 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 ZNF734P-201ENST00000419494 1534 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.68□□□□□ -1.66
CNOT4O95628 SAGE4P-201ENST00000442271 3381 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CNOT4O95628 RNY1P12-201ENST00000364251 105 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 Y_RNA.315-201ENST00000365117 102 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 RNU6-169P-201ENST00000365336 107 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 Y_RNA.384-201ENST00000383909 102 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 MIR708-201ENST00000390708 88 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AL356967.1-201ENST00000406305 431 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 OR4K12P-201ENST00000406538 961 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 RN7SKP177-201ENST00000410567 355 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 681.2 ms