Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 BMS1P21-201ENST00000634565 365 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 AC017104.4-201ENST00000636283 1592 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.53□□□□□ -1.52
VAMP4O75379 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.52
VAMP4O75379 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 AP002907.1-201ENST00000606361 1430 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 Y_RNA.1-201ENST00000352915 104 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 RNU1-14P-201ENST00000362759 152 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 RNU6-1090P-201ENST00000364065 94 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 Y_RNA.295-201ENST00000364918 102 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 RNU6-780P-201ENST00000391030 104 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 RNA5SP36-201ENST00000410197 133 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 USP9YP36-201ENST00000424581 829 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 ARPC3P1-201ENST00000437218 533 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 RPL23AP16-201ENST00000441715 421 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC079448.1-201ENST00000449377 373 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.52□□□□□ -1.53
VAMP4O75379 RPL23AP81-201ENST00000455252 467 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC026410.2-201ENST00000460281 156 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC079804.1-201ENST00000461922 436 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 AC091951.2-201ENST00000500762 203 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC093840.1-201ENST00000511599 336 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC034159.1-201ENST00000513885 583 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 COX6CP8-201ENST00000522620 226 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC100770.1-201ENST00000532310 322 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 CYCSP29-201ENST00000533731 318 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AP003034.1-201ENST00000534621 422 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC006064.5-201ENST00000541782 248 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC068714.1-201ENST00000559623 800 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AL157394.1-201ENST00000562983 1224 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC025678.1-201ENST00000567861 338 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 HMGN1P30-201ENST00000589286 268 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AL117336.2-201ENST00000602435 335 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AL020991.1-201ENST00000612314 373 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AL138721.1-201ENST00000616756 179 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AC131238.1-201ENST00000617135 328 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 AL445567.2-201ENST00000618935 498 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 AC099654.10-201ENST00000640395 161 ntBASIC5.52□□□□□ -1.53
VAMP4O75379 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP4O75379 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.52□□□□□ -1.53
VAMP4O75379 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.52□□□□□ -1.53
VAMP4O75379 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP4O75379 PHKBP1-201ENST00000450951 1951 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 MFSD8-242ENST00000641690 4199 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 RPL23AP57-201ENST00000332361 466 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 RNU4-76P-201ENST00000364509 141 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 RNU6-921P-201ENST00000384361 107 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC009237.10-201ENST00000414112 510 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 RPS3AP9-201ENST00000417027 792 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 USP9YP27-201ENST00000418455 438 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP4O75379 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 AC234779.1-201ENST00000425910 285 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 FCF1P1-201ENST00000432690 571 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 RPL17P49-201ENST00000443728 411 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 TPT1P14-201ENST00000448018 505 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC092001.1-201ENST00000453012 261 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC005008.1-201ENST00000456151 612 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP4O75379 RPS29P25-201ENST00000481709 171 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 MTND1P3-201ENST00000484956 952 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP4O75379 RPL35P6-201ENST00000490024 372 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP4O75379 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms