Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC098614.4-201ENST00000607601 462 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AF250324.2-201ENST00000608299 610 ntBASIC3.83□□□□□ -1.8
LDB3O75112 MIR6867-201ENST00000610636 67 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC068722.2-201ENST00000618734 544 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC095031.1-201ENST00000623685 672 ntBASIC3.83□□□□□ -1.8
LDB3O75112 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB3O75112 AC079228.1-201ENST00000624774 1049 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC099654.12-201ENST00000639868 649 ntBASIC3.83□□□□□ -1.8
LDB3O75112 MTCO1P14-201ENST00000441695 1559 ntBASIC3.83□□□□□ -1.8
LDB3O75112 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB3O75112 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB3O75112 MAPK10-253ENST00000641010 4072 ntBASIC3.83□□□□□ -1.8
LDB3O75112 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB3O75112 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB3O75112 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 RLIMP1-201ENST00000339626 1680 ntBASIC3.82□□□□□ -1.8
LDB3O75112 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB3O75112 ELL2P4-201ENST00000446870 1376 ntBASIC3.82□□□□□ -1.8
LDB3O75112 Y_RNA.303-201ENST00000364998 94 ntBASIC3.82□□□□□ -1.8
LDB3O75112 SNORA70E-201ENST00000384492 135 ntBASIC3.82□□□□□ -1.8
LDB3O75112 MIR153-1-201ENST00000384914 90 ntBASIC3.82□□□□□ -1.8
LDB3O75112 ENSAP1-201ENST00000392855 326 ntBASIC3.82□□□□□ -1.8
LDB3O75112 SNRPEP2-201ENST00000397592 279 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RNA5SP317-201ENST00000410176 116 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RNA5SP311-201ENST00000411290 116 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB3O75112 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.82□□□□□ -1.8
LDB3O75112 RPS7P13-201ENST00000413955 498 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RPL31P45-201ENST00000419532 356 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RPS12P23-201ENST00000419579 400 ntBASIC3.82□□□□□ -1.8
LDB3O75112 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.82□□□□□ -1.8
LDB3O75112 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 AL953862.1-201ENST00000423016 168 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB3O75112 AL512286.1-201ENST00000439244 400 ntBASIC3.82□□□□□ -1.8
LDB3O75112 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB3O75112 TRGVB-201ENST00000453257 471 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC092757.1-201ENST00000467293 467 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RPL21P103-201ENST00000479921 488 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC005726.1-201ENST00000494679 427 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC138853.1-201ENST00000503549 823 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB3O75112 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB3O75112 AC016065.2-201ENST00000514530 444 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RNU6-718P-201ENST00000516166 105 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RNA5SP315-201ENST00000516340 116 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RNA5SP312-201ENST00000517068 116 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB3O75112 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.82□□□□□ -1.8
LDB3O75112 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.82□□□□□ -1.8
LDB3O75112 ZNF705CP-201ENST00000530515 889 ntBASIC3.82□□□□□ -1.8
LDB3O75112 EEF1B2P4-201ENST00000551398 348 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.82□□□□□ -1.8
LDB3O75112 TPRKBP2-201ENST00000565969 475 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC092325.1-201ENST00000566449 554 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
LDB3O75112 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 AC008638.3-201ENST00000603341 463 ntBASIC3.82□□□□□ -1.8
LDB3O75112 RNU6-88P-201ENST00000606801 100 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 RNU4-89P-201ENST00000607443 133 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AL589743.7-201ENST00000612637 233 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC243773.3-201ENST00000613270 256 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC072046.2-201ENST00000618366 268 ntBASIC3.82□□□□□ -1.8
LDB3O75112 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 AC112484.5-201ENST00000624189 228 ntBASIC3.82□□□□□ -1.8
LDB3O75112 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
LDB3O75112 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
LDB3O75112 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB3O75112 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB3O75112 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB3O75112 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB3O75112 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 CR848007.1-201ENST00000442354 1699 ntBASIC3.81□□□□□ -1.8
LDB3O75112 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 CR383658.2-201ENST00000547576 1525 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB3O75112 AL122126.1-201ENST00000546905 1318 ntBASIC3.81□□□□□ -1.8
LDB3O75112 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB3O75112 OR52B1P-201ENST00000316506 909 ntBASIC3.81□□□□□ -1.8
LDB3O75112 FGF7P2-201ENST00000332473 296 ntBASIC3.81□□□□□ -1.8
LDB3O75112 SNORA60-201ENST00000362396 134 ntBASIC3.81□□□□□ -1.8
LDB3O75112 Y_RNA.554-201ENST00000384672 102 ntBASIC3.81□□□□□ -1.8
LDB3O75112 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 EIF1P1-201ENST00000421436 341 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB3O75112 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 AC093698.1-201ENST00000423843 571 ntBASIC3.81□□□□□ -1.8
LDB3O75112 RWDD4P2-201ENST00000426392 563 ntBASIC3.81□□□□□ -1.8
LDB3O75112 RPS27AP12-201ENST00000429552 465 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms