Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC008083.2-201ENST00000546707 476 ntBASIC3.69□□□□□ -1.82
BRD4O60885 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.69□□□□□ -1.82
BRD4O60885 MIR3690-201ENST00000580266 75 ntBASIC3.69□□□□□ -1.82
BRD4O60885 MIR4506-201ENST00000584693 77 ntBASIC3.69□□□□□ -1.82
BRD4O60885 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.69□□□□□ -1.82
BRD4O60885 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.69□□□□□ -1.82
BRD4O60885 AC079089.3-201ENST00000603094 673 ntBASIC3.69□□□□□ -1.82
BRD4O60885 AL451074.6-201ENST00000608512 729 ntBASIC3.69□□□□□ -1.82
BRD4O60885 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.69□□□□□ -1.82
BRD4O60885 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.69□□□□□ -1.82
BRD4O60885 CTSLP2-204ENST00000629029 392 ntBASIC3.69□□□□□ -1.82
BRD4O60885 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.69□□□□□ -1.82
BRD4O60885 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.68□□□□□ -1.82
BRD4O60885 AL355379.1-201ENST00000405542 640 ntBASIC3.68□□□□□ -1.82
BRD4O60885 RN7SKP123-201ENST00000410732 291 ntBASIC3.68□□□□□ -1.82
BRD4O60885 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.68□□□□□ -1.82
BRD4O60885 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.68□□□□□ -1.82
BRD4O60885 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.68□□□□□ -1.82
BRD4O60885 VN1R48P-201ENST00000448149 1036 ntBASIC3.68□□□□□ -1.82
BRD4O60885 OR6C72P-201ENST00000451403 892 ntBASIC3.68□□□□□ -1.82
BRD4O60885 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.68□□□□□ -1.82
BRD4O60885 OR8L1P-201ENST00000534005 955 ntBASIC3.68□□□□□ -1.82
BRD4O60885 SYF2P1-201ENST00000550658 413 ntBASIC3.68□□□□□ -1.82
BRD4O60885 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.68□□□□□ -1.82
BRD4O60885 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRD4O60885 AC007336.1-201ENST00000576365 3828 ntBASIC3.68□□□□□ -1.82
BRD4O60885 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRD4O60885 AC109315.1-201ENST00000584143 1347 ntBASIC3.68□□□□□ -1.82
BRD4O60885 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRD4O60885 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRD4O60885 AC022031.1-201ENST00000585985 2593 ntBASIC3.67□□□□□ -1.82
BRD4O60885 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
BRD4O60885 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.67□□□□□ -1.82
BRD4O60885 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRD4O60885 RNA5SP344-201ENST00000411081 104 ntBASIC3.67□□□□□ -1.82
BRD4O60885 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.67□□□□□ -1.82
BRD4O60885 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
BRD4O60885 GSTA11P-201ENST00000452866 669 ntBASIC3.67□□□□□ -1.82
BRD4O60885 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.67□□□□□ -1.82
BRD4O60885 RPS20P22-201ENST00000473700 357 ntBASIC3.67□□□□□ -1.82
BRD4O60885 MTND4LP22-201ENST00000508209 276 ntBASIC3.67□□□□□ -1.82
BRD4O60885 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.67□□□□□ -1.82
BRD4O60885 TMEM248P1-201ENST00000510579 951 ntBASIC3.67□□□□□ -1.82
BRD4O60885 AP001646.1-201ENST00000527936 915 ntBASIC3.67□□□□□ -1.82
BRD4O60885 AP000873.5-201ENST00000533906 236 ntBASIC3.67□□□□□ -1.82
BRD4O60885 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.67□□□□□ -1.82
BRD4O60885 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.67□□□□□ -1.82
BRD4O60885 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.67□□□□□ -1.82
BRD4O60885 MIR6733-201ENST00000635723 61 ntBASIC3.67□□□□□ -1.82
BRD4O60885 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.67□□□□□ -1.82
BRD4O60885 AC002546.1-201ENST00000588041 2504 ntBASIC3.67□□□□□ -1.82
BRD4O60885 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRD4O60885 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.67□□□□□ -1.82
BRD4O60885 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRD4O60885 ZNF658B-202ENST00000615961 3375 ntBASIC3.66□□□□□ -1.82
BRD4O60885 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRD4O60885 AL512633.1-201ENST00000399931 655 ntBASIC3.66□□□□□ -1.82
BRD4O60885 AL356057.3-201ENST00000402607 340 ntBASIC3.66□□□□□ -1.82
BRD4O60885 RNU2-71P-201ENST00000411395 189 ntBASIC3.66□□□□□ -1.82
BRD4O60885 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.66□□□□□ -1.82
BRD4O60885 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.66□□□□□ -1.82
BRD4O60885 OR2B8P-201ENST00000432841 938 ntBASIC3.66□□□□□ -1.82
BRD4O60885 WASF1P1-201ENST00000447560 1131 ntBASIC3.66□□□□□ -1.82
BRD4O60885 MTCYBP14-201ENST00000457471 715 ntBASIC3.66□□□□□ -1.82
BRD4O60885 snoU13.23-201ENST00000458863 104 ntBASIC3.66□□□□□ -1.82
BRD4O60885 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.66□□□□□ -1.82
BRD4O60885 HMGB3P15-201ENST00000507326 574 ntBASIC3.66□□□□□ -1.82
BRD4O60885 RNA5SP148-201ENST00000516527 94 ntBASIC3.66□□□□□ -1.82
BRD4O60885 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.66□□□□□ -1.82
BRD4O60885 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.66□□□□□ -1.82
BRD4O60885 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.66□□□□□ -1.82
BRD4O60885 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.66□□□□□ -1.82
BRD4O60885 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.66□□□□□ -1.82
BRD4O60885 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRD4O60885 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRD4O60885 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
BRD4O60885 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRD4O60885 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BRD4O60885 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
BRD4O60885 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
BRD4O60885 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.65□□□□□ -1.82
BRD4O60885 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.65□□□□□ -1.82
BRD4O60885 HSPE1P28-201ENST00000443139 211 ntBASIC3.65□□□□□ -1.82
BRD4O60885 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.65□□□□□ -1.82
BRD4O60885 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.65□□□□□ -1.82
BRD4O60885 AL590639.1-201ENST00000456484 337 ntBASIC3.65□□□□□ -1.82
BRD4O60885 NF1P3-201ENST00000457709 450 ntBASIC3.65□□□□□ -1.82
BRD4O60885 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.65□□□□□ -1.82
BRD4O60885 AC110792.2-201ENST00000510278 224 ntBASIC3.65□□□□□ -1.82
BRD4O60885 OR4A45P-201ENST00000529954 901 ntBASIC3.65□□□□□ -1.82
BRD4O60885 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.65□□□□□ -1.82
BRD4O60885 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.65□□□□□ -1.82
BRD4O60885 AC098826.3-201ENST00000603823 466 ntBASIC3.65□□□□□ -1.82
BRD4O60885 MIR4496-201ENST00000635896 61 ntBASIC3.65□□□□□ -1.82
BRD4O60885 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BRD4O60885 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BRD4O60885 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.65□□□□□ -1.83
BRD4O60885 DYNLT3P1-201ENST00000378574 347 ntBASIC3.64□□□□□ -1.83
BRD4O60885 ATF1P1-201ENST00000406040 927 ntBASIC3.64□□□□□ -1.83
BRD4O60885 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms