Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 AP003072.2-201ENST00000527756 676 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 AL389895.1-201ENST00000554127 252 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC115085.1-201ENST00000588924 229 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC104687.2-201ENST00000604442 342 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC012603.1-201ENST00000606424 528 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AC243773.3-201ENST00000613270 256 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 AL354950.2-201ENST00000617939 290 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC099494.2-201ENST00000623371 978 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 OR2L1P-202ENST00000641567 1023 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TRIM13O60858 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM13O60858 AC104260.2-201ENST00000623551 3497 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM13O60858 SSXP3-201ENST00000442971 1300 ntBASIC4.91□□□□□ -1.62
TRIM13O60858 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM13O60858 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM13O60858 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.62
TRIM13O60858 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM13O60858 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM13O60858 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM13O60858 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM13O60858 Y_RNA.100-201ENST00000363141 102 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 Y_RNA.135-201ENST00000363439 95 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 Y_RNA.255-201ENST00000364581 97 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 Y_RNA.257-201ENST00000364596 102 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 RNU4-20P-201ENST00000365601 151 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 RNU6-209P-201ENST00000384118 107 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 SNORD3H-201ENST00000384486 214 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AL591416.1-201ENST00000404015 867 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AL359634.1-202ENST00000404721 284 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 BTBD10P2-201ENST00000404779 676 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 RN7SKP247-201ENST00000411094 308 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 HMGB3P2-201ENST00000411913 584 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM13O60858 AC233981.1-201ENST00000423224 461 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 AC092162.1-201ENST00000432828 434 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 MRPL48P1-201ENST00000445390 636 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC002553.2-201ENST00000453217 340 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AL445433.1-201ENST00000457507 257 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 RNU7-63P-201ENST00000459054 62 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 RPL7P22-201ENST00000466005 733 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TRIM13O60858 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 TMEM248P1-201ENST00000510579 951 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM13O60858 RN7SKP70-201ENST00000516655 271 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 RNU6-201P-201ENST00000517100 61 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 RN7SKP295-201ENST00000517264 153 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 PTP4A1P6-201ENST00000531034 478 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AP002404.1-201ENST00000532005 451 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 APOOP3-201ENST00000536787 586 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC024940.3-201ENST00000538551 316 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM13O60858 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM13O60858 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM13O60858 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM13O60858 AC243654.2-201ENST00000612843 443 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM13O60858 uc_338.15-201ENST00000615470 191 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC127024.6-201ENST00000621598 424 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM13O60858 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM13O60858 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 AC090337.1-201ENST00000579651 2074 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 BTBD10P1-201ENST00000549824 1352 ntBASIC4.9□□□□□ -1.63
TRIM13O60858 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM13O60858 AC134882.1-201ENST00000603738 1676 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM13O60858 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM13O60858 MTND5P27-201ENST00000428871 1720 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms