Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.61□□□□□ -1.83
LMX1BO60663 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.61□□□□□ -1.83
LMX1BO60663 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.61□□□□□ -1.83
LMX1BO60663 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.61□□□□□ -1.83
LMX1BO60663 AC068714.1-201ENST00000559623 800 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 AC234778.2-201ENST00000566241 354 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 AC141257.3-201ENST00000572906 215 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 SNORD39.3-201ENST00000584451 71 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 AC017100.2-201ENST00000584628 355 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.61□□□□□ -1.83
LMX1BO60663 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.61□□□□□ -1.83
LMX1BO60663 RNU6-88P-201ENST00000606801 100 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 AF250324.2-201ENST00000608299 610 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 AC233309.1-201ENST00000619522 751 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 MIR7702-201ENST00000621931 59 ntBASIC3.61□□□□□ -1.83
LMX1BO60663 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.61□□□□□ -1.83
LMX1BO60663 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LMX1BO60663 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMX1BO60663 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
LMX1BO60663 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LMX1BO60663 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 AC007390.2-201ENST00000606229 3803 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
LMX1BO60663 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.6□□□□□ -1.83
LMX1BO60663 AC134882.1-201ENST00000603738 1676 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMX1BO60663 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LMX1BO60663 RNU6-1122P-201ENST00000384449 107 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 Y_RNA.554-201ENST00000384672 102 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 HSPD1P16-201ENST00000402302 394 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC073264.1-201ENST00000411508 416 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 RPL17P12-201ENST00000413391 526 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC108032.1-201ENST00000416706 207 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 OFD1P18Y-201ENST00000420889 959 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.6□□□□□ -1.83
LMX1BO60663 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.6□□□□□ -1.83
LMX1BO60663 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.6□□□□□ -1.83
LMX1BO60663 GDI2P2-201ENST00000445131 608 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AL162151.2-201ENST00000448875 158 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 FGF7P3-201ENST00000454645 303 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 RN7SL542P-201ENST00000467147 294 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.6□□□□□ -1.83
LMX1BO60663 MTND6P6-201ENST00000478031 263 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC013828.1-201ENST00000481845 158 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 MTAPP1-201ENST00000489154 819 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.6□□□□□ -1.83
LMX1BO60663 AC109464.2-201ENST00000510242 943 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 RNU6-1178P-201ENST00000516674 107 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 RNA5SP73-201ENST00000516744 108 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.6□□□□□ -1.83
LMX1BO60663 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.6□□□□□ -1.83
LMX1BO60663 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.6□□□□□ -1.83
LMX1BO60663 HMGB3P26-201ENST00000560051 582 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AP005205.1-201ENST00000563503 508 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.6□□□□□ -1.83
LMX1BO60663 RPL23AP87-202ENST00000573039 466 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC022655.2-201ENST00000577280 318 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AL606834.2-201ENST00000602954 668 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 SEPT7P9-203ENST00000604116 343 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC010200.2-201ENST00000605098 235 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC090517.2-201ENST00000614966 680 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.6□□□□□ -1.83
LMX1BO60663 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC073534.2-201ENST00000620377 381 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC116563.2-201ENST00000624751 535 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AL773545.4-201ENST00000637262 310 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AC244258.1-201ENST00000637553 1071 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 AL513478.4-201ENST00000641636 310 ntBASIC3.6□□□□□ -1.83
LMX1BO60663 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMX1BO60663 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LMX1BO60663 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LMX1BO60663 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMX1BO60663 AL133243.3-201ENST00000617415 3004 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC097504.1-201ENST00000515103 2415 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC074029.4-201ENST00000624796 1859 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LMX1BO60663 RNU6-777P-201ENST00000364265 104 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RN7SKP226-201ENST00000364912 300 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RNU5E-5P-201ENST00000365379 116 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LMX1BO60663 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms