Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 TXNL1P1-201ENST00000429528 554 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AL590233.1-201ENST00000430017 456 ntBASIC3.52□□□□□ -1.85
SNX3O60493 ARF4P2-201ENST00000430209 526 ntBASIC3.52□□□□□ -1.85
SNX3O60493 ZYG11AP1-201ENST00000430329 837 ntBASIC3.52□□□□□ -1.85
SNX3O60493 MTCYBP34-201ENST00000439552 670 ntBASIC3.52□□□□□ -1.85
SNX3O60493 MTCO3P11-201ENST00000455103 774 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AL109741.2-201ENST00000455561 343 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX3O60493 AC011276.1-201ENST00000469688 323 ntBASIC3.52□□□□□ -1.85
SNX3O60493 UQCRHP4-201ENST00000471686 272 ntBASIC3.52□□□□□ -1.85
SNX3O60493 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SNX3O60493 AC004263.1-201ENST00000479327 332 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX3O60493 AC093853.1-201ENST00000515689 483 ntBASIC3.52□□□□□ -1.85
SNX3O60493 SNORA70.19-201ENST00000516717 90 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX3O60493 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX3O60493 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX3O60493 MIR4999-201ENST00000585029 91 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX3O60493 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX3O60493 SNRPGP15-201ENST00000600149 222 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC006539.2-201ENST00000601729 572 ntBASIC3.52□□□□□ -1.85
SNX3O60493 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.52□□□□□ -1.85
SNX3O60493 Mico1.1-201ENST00000611698 204 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC079228.1-201ENST00000624774 1049 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC138649.5-201ENST00000637456 137 ntBASIC3.52□□□□□ -1.85
SNX3O60493 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 AL022578.1-201ENST00000439330 1433 ntBASIC3.52□□□□□ -1.85
SNX3O60493 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNX3O60493 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 RNU6-1200P-201ENST00000384162 107 ntBASIC3.51□□□□□ -1.85
SNX3O60493 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
SNX3O60493 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX3O60493 AC092447.6-201ENST00000414578 210 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 TOMM22P1-201ENST00000418578 312 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC007742.1-201ENST00000425789 329 ntBASIC3.51□□□□□ -1.85
SNX3O60493 RPL23AP82-202ENST00000427528 469 ntBASIC3.51□□□□□ -1.85
SNX3O60493 ELOCP26-201ENST00000436067 329 ntBASIC3.51□□□□□ -1.85
SNX3O60493 YWHAZP7-201ENST00000436906 631 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AL354941.1-201ENST00000438600 464 ntBASIC3.51□□□□□ -1.85
SNX3O60493 ISCA1P2-201ENST00000438679 421 ntBASIC3.51□□□□□ -1.85
SNX3O60493 HSPE1P28-201ENST00000443139 211 ntBASIC3.51□□□□□ -1.85
SNX3O60493 SETD6P1-201ENST00000444575 317 ntBASIC3.51□□□□□ -1.85
SNX3O60493 MTND1P31-201ENST00000449206 961 ntBASIC3.51□□□□□ -1.85
SNX3O60493 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.51□□□□□ -1.85
SNX3O60493 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 USP9YP10-201ENST00000454868 628 ntBASIC3.51□□□□□ -1.85
SNX3O60493 SUMO2P2-201ENST00000456482 255 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 UBDP1-202ENST00000457888 382 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AP001992.1-205ENST00000462248 379 ntBASIC3.51□□□□□ -1.85
SNX3O60493 CENPBD1P1-201ENST00000464061 469 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SNX3O60493 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.51□□□□□ -1.85
SNX3O60493 DUXAP5-201ENST00000529668 529 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 UBE2NP1-201ENST00000545592 458 ntBASIC3.51□□□□□ -1.85
SNX3O60493 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
SNX3O60493 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SNX3O60493 IPO5P1-202ENST00000600039 287 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC104785.1-201ENST00000603220 588 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AL133507.1-201ENST00000605269 557 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC023043.4-201ENST00000612081 449 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC114781.5-201ENST00000615297 108 ntBASIC3.51□□□□□ -1.85
SNX3O60493 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.51□□□□□ -1.85
SNX3O60493 AC103706.2-201ENST00000638080 240 ntBASIC3.51□□□□□ -1.85
SNX3O60493 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX3O60493 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX3O60493 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX3O60493 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 SRP72P2-201ENST00000344851 1979 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms