Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR491-201ENST00000384877 84 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 AC016769.3-201ENST00000396562 315 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 AC127391.1-201ENST00000411737 98 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 HMGB3P12-201ENST00000438745 556 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AL133547.1-201ENST00000448546 220 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC022364.2-201ENST00000457963 554 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 RNU6-420P-201ENST00000458780 107 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.72□□□□□ -1.49
GRIN3BO60391 OR5AL2P-201ENST00000532185 920 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC010680.3-201ENST00000604215 520 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 AC007179.3-201ENST00000604976 235 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 OR10AB1P-201ENST00000609613 938 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 AL133173.2-201ENST00000614270 90 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 MIR6875-201ENST00000617506 72 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GRIN3BO60391 MIR8059-201ENST00000620427 81 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 AC112204.3-201ENST00000623822 332 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 AC140479.6-201ENST00000633535 357 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GRIN3BO60391 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.72□□□□□ -1.49
GRIN3BO60391 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
GRIN3BO60391 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 ABCC13-202ENST00000463099 3842 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.72□□□□□ -1.49
GRIN3BO60391 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
GRIN3BO60391 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
GRIN3BO60391 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.71□□□□□ -1.49
GRIN3BO60391 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
GRIN3BO60391 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GRIN3BO60391 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
GRIN3BO60391 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GRIN3BO60391 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GRIN3BO60391 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GRIN3BO60391 AC021146.4-201ENST00000309229 279 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 Y_RNA.72-201ENST00000362894 103 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 RNY3P3-201ENST00000363816 102 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 RNU1-132P-201ENST00000364300 164 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GRIN3BO60391 AC097374.1-203ENST00000400783 485 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AC079809.1-201ENST00000415468 276 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 SDCBPP1-201ENST00000440192 890 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 HSPE1P28-201ENST00000443139 211 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AL691482.1-201ENST00000453255 87 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 RPL7P15-201ENST00000461190 712 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AC006511.1-201ENST00000470614 315 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 RN7SL558P-201ENST00000497468 299 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AC016559.2-201ENST00000510759 359 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GRIN3BO60391 AP003072.2-201ENST00000527756 676 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 SUB1P2-201ENST00000556401 297 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 RPL21P12-201ENST00000559810 515 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 MIR3671-201ENST00000580455 88 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.71□□□□□ -1.5
GRIN3BO60391 AC009233.1-201ENST00000616477 371 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 AC006504.8-201ENST00000621046 635 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GRIN3BO60391 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GRIN3BO60391 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GRIN3BO60391 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.71□□□□□ -1.5
GRIN3BO60391 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
GRIN3BO60391 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
GRIN3BO60391 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.71□□□□□ -1.5
GRIN3BO60391 MAPK10-349ENST00000641767 3661 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
GRIN3BO60391 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GRIN3BO60391 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
GRIN3BO60391 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GRIN3BO60391 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GRIN3BO60391 MIR133A2-201ENST00000347538 102 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 AL161781.1-201ENST00000354277 403 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 AL024474.1-201ENST00000404655 591 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 BTBD10P2-201ENST00000404779 676 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 AL035079.1-201ENST00000405210 287 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 U3.35-201ENST00000408405 208 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 AL356095.1-201ENST00000417217 199 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 AC013429.2-201ENST00000418798 781 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 AC009965.2-201ENST00000425328 970 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.7□□□□□ -1.5
GRIN3BO60391 COX6CP15-201ENST00000426313 211 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms