Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC090116.1-201ENST00000615679 446 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC068722.2-201ENST00000618734 544 ntBASIC2.76□□□□□ -1.97
SGCEO43556 AC022509.4-201ENST00000621404 572 ntBASIC2.76□□□□□ -1.97
SGCEO43556 MTND2P41-201ENST00000637599 773 ntBASIC2.76□□□□□ -1.97
SGCEO43556 MTND5P24-201ENST00000438892 1767 ntBASIC2.76□□□□□ -1.97
SGCEO43556 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SGCEO43556 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SGCEO43556 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 AC005300.1-201ENST00000428401 373 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AC005326.1-201ENST00000429197 123 ntBASIC2.75□□□□□ -1.97
SGCEO43556 SAR1AP4-201ENST00000429225 591 ntBASIC2.75□□□□□ -1.97
SGCEO43556 UBE2V1P6-201ENST00000430840 422 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AC108734.1-201ENST00000439549 399 ntBASIC2.75□□□□□ -1.97
SGCEO43556 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.75□□□□□ -1.97
SGCEO43556 HMGB3P6-201ENST00000444896 598 ntBASIC2.75□□□□□ -1.97
SGCEO43556 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SGCEO43556 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 RN7SL863P-201ENST00000462370 296 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AC091153.1-201ENST00000466297 402 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.75□□□□□ -1.97
SGCEO43556 KLHL2P1-201ENST00000508691 521 ntBASIC2.75□□□□□ -1.97
SGCEO43556 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.75□□□□□ -1.97
SGCEO43556 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.75□□□□□ -1.97
SGCEO43556 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.75□□□□□ -1.97
SGCEO43556 AL606834.2-201ENST00000602954 668 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AL355802.4-201ENST00000607635 548 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AC016542.1-201ENST00000608259 493 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AC138932.5-201ENST00000617759 563 ntBASIC2.75□□□□□ -1.97
SGCEO43556 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.75□□□□□ -1.97
SGCEO43556 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.75□□□□□ -1.97
SGCEO43556 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.75□□□□□ -1.97
SGCEO43556 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
SGCEO43556 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SGCEO43556 AC244517.1-201ENST00000606030 2086 ntBASIC2.75□□□□□ -1.97
SGCEO43556 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
SGCEO43556 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SGCEO43556 MTND5P31-201ENST00000419366 1374 ntBASIC2.74□□□□□ -1.97
SGCEO43556 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SGCEO43556 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.74□□□□□ -1.97
SGCEO43556 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SGCEO43556 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SGCEO43556 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SGCEO43556 RNU6-989P-201ENST00000362756 107 ntBASIC2.74□□□□□ -1.97
SGCEO43556 U3.6-201ENST00000363622 211 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RNA5SP267-201ENST00000364893 126 ntBASIC2.74□□□□□ -1.97
SGCEO43556 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SGCEO43556 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SGCEO43556 MIR525-201ENST00000384978 85 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RNU6-821P-201ENST00000390995 107 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RPL21P75-201ENST00000396599 483 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RPL21P28-201ENST00000401418 483 ntBASIC2.74□□□□□ -1.97
SGCEO43556 MTND4LP20-201ENST00000402379 270 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AL592114.1-201ENST00000403842 483 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RNU4-47P-201ENST00000410876 114 ntBASIC2.74□□□□□ -1.97
SGCEO43556 PAICSP7-201ENST00000419829 962 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AL353678.1-201ENST00000422735 741 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.74□□□□□ -1.97
SGCEO43556 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.74□□□□□ -1.97
SGCEO43556 Z75741.1-201ENST00000446793 314 ntBASIC2.74□□□□□ -1.97
SGCEO43556 BTF3P5-201ENST00000457252 467 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RPL21P39-201ENST00000463605 483 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AC011979.1-201ENST00000472300 483 ntBASIC2.74□□□□□ -1.97
SGCEO43556 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SGCEO43556 RPL21P93-201ENST00000480465 489 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AC233702.1-201ENST00000482905 502 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AC087190.1-201ENST00000484462 480 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AC093591.1-201ENST00000491435 481 ntBASIC2.74□□□□□ -1.97
SGCEO43556 RPL21P16-201ENST00000495531 483 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.74□□□□□ -1.97
SGCEO43556 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.74□□□□□ -1.97
SGCEO43556 DNAJC8P1-201ENST00000554535 372 ntBASIC2.74□□□□□ -1.97
SGCEO43556 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.74□□□□□ -1.97
SGCEO43556 AC074051.3-201ENST00000570238 358 ntBASIC2.74□□□□□ -1.97
SGCEO43556 MIR5680-201ENST00000577577 84 ntBASIC2.74□□□□□ -1.97
SGCEO43556 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.74□□□□□ -1.97
SGCEO43556 AC021851.1-201ENST00000608537 1082 ntBASIC2.74□□□□□ -1.97
SGCEO43556 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.74□□□□□ -1.97
SGCEO43556 AC016911.1-201ENST00000613297 452 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AL162574.2-201ENST00000614618 657 ntBASIC2.74□□□□□ -1.97
SGCEO43556 AC139713.2-210ENST00000641741 992 ntBASIC2.74□□□□□ -1.97
SGCEO43556 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.74□□□□□ -1.97
SGCEO43556 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.73□□□□□ -1.97
SGCEO43556 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SGCEO43556 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SGCEO43556 MTND5P11-201ENST00000511037 1812 ntBASIC2.73□□□□□ -1.97
SGCEO43556 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SGCEO43556 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SGCEO43556 SNORD15B-201ENST00000384714 146 ntBASIC2.73□□□□□ -1.97
SGCEO43556 MTND4P13-201ENST00000402078 1023 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms