Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP003117.2-201ENST00000606010 545 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC091979.2-201ENST00000607514 214 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC105429.2-201ENST00000610567 517 ntBASIC4.42□□□□□ -1.7
PROM1O43490 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 AC002553.4-201ENST00000616896 331 ntBASIC4.42□□□□□ -1.7
PROM1O43490 DUXAP9-208ENST00000622815 614 ntBASIC4.42□□□□□ -1.7
PROM1O43490 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PROM1O43490 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.42□□□□□ -1.7
PROM1O43490 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.42□□□□□ -1.7
PROM1O43490 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.42□□□□□ -1.7
PROM1O43490 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 MTND4P29-201ENST00000503122 1372 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AL133243.3-201ENST00000617415 3004 ntBASIC4.41□□□□□ -1.7
PROM1O43490 XPOTP1-201ENST00000443317 2398 ntBASIC4.41□□□□□ -1.7
PROM1O43490 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PROM1O43490 AC117529.2-201ENST00000512159 2068 ntBASIC4.41□□□□□ -1.7
PROM1O43490 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PROM1O43490 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PROM1O43490 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 GNG5P1-201ENST00000255500 204 ntBASIC4.41□□□□□ -1.7
PROM1O43490 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PROM1O43490 RNA5SP391-201ENST00000363456 119 ntBASIC4.41□□□□□ -1.7
PROM1O43490 SNORA70.2-201ENST00000364506 135 ntBASIC4.41□□□□□ -1.7
PROM1O43490 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PROM1O43490 Y_RNA.409-201ENST00000383990 98 ntBASIC4.41□□□□□ -1.7
PROM1O43490 Y_RNA.573-201ENST00000384763 105 ntBASIC4.41□□□□□ -1.7
PROM1O43490 HDGFP1-201ENST00000405943 252 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AL133384.1-201ENST00000412744 351 ntBASIC4.41□□□□□ -1.7
PROM1O43490 TPMTP2-201ENST00000414372 726 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 USP12PX-201ENST00000432383 1057 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 RPS3AP54-201ENST00000435535 734 ntBASIC4.41□□□□□ -1.7
PROM1O43490 RSU1P2-202ENST00000437884 485 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.41□□□□□ -1.7
PROM1O43490 UBE2V1P7-201ENST00000446395 340 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC002381.1-201ENST00000447049 280 ntBASIC4.41□□□□□ -1.7
PROM1O43490 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.41□□□□□ -1.7
PROM1O43490 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 RPS20P21-201ENST00000466859 343 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC103987.1-201ENST00000473394 348 ntBASIC4.41□□□□□ -1.7
PROM1O43490 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 KCTD9P5-201ENST00000504141 1170 ntBASIC4.41□□□□□ -1.7
PROM1O43490 HMGB1P29-201ENST00000505659 499 ntBASIC4.41□□□□□ -1.7
PROM1O43490 Y_RNA.704-201ENST00000516851 102 ntBASIC4.41□□□□□ -1.7
PROM1O43490 RNU2-46P-201ENST00000517038 113 ntBASIC4.41□□□□□ -1.7
PROM1O43490 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 AK6P1-201ENST00000540219 478 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 HMGB1P33-201ENST00000563485 527 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.41□□□□□ -1.7
PROM1O43490 MIR4719-201ENST00000585233 84 ntBASIC4.41□□□□□ -1.7
PROM1O43490 NRBF2P1-201ENST00000587407 859 ntBASIC4.41□□□□□ -1.7
PROM1O43490 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 CKS1BP3-201ENST00000600888 237 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC103792.1-201ENST00000603591 919 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC005191.1-201ENST00000603950 358 ntBASIC4.41□□□□□ -1.7
PROM1O43490 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 AC017083.3-201ENST00000609955 700 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC009268.2-201ENST00000621925 457 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC009033.1-201ENST00000624279 431 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AC055839.1-201ENST00000634467 498 ntBASIC4.41□□□□□ -1.7
PROM1O43490 LRRC77P-213ENST00000637727 880 ntBASIC4.41□□□□□ -1.7
PROM1O43490 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PROM1O43490 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 PNPT1P2-201ENST00000456768 2050 ntBASIC4.41□□□□□ -1.7
PROM1O43490 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.41□□□□□ -1.7
PROM1O43490 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PROM1O43490 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.4□□□□□ -1.7
PROM1O43490 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.4□□□□□ -1.71
PROM1O43490 AC068538.1-201ENST00000376856 336 ntBASIC4.4□□□□□ -1.71
PROM1O43490 MIR195-201ENST00000385194 87 ntBASIC4.4□□□□□ -1.71
PROM1O43490 SNORD96B-201ENST00000386148 79 ntBASIC4.4□□□□□ -1.71
PROM1O43490 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC016769.3-201ENST00000396562 315 ntBASIC4.4□□□□□ -1.71
PROM1O43490 LAP3P1-201ENST00000403648 294 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC138393.2-201ENST00000414742 246 ntBASIC4.4□□□□□ -1.71
PROM1O43490 MTATP6P27-201ENST00000416987 621 ntBASIC4.4□□□□□ -1.71
PROM1O43490 RPL31P45-201ENST00000419532 356 ntBASIC4.4□□□□□ -1.71
PROM1O43490 PDSS1P1-201ENST00000422953 1114 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.4□□□□□ -1.71
PROM1O43490 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 AC096632.1-201ENST00000427395 310 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms