Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 AC011266.1-201ENST00000624119 3569 ntBASIC4.78□□□□□ -1.64
PRPF3O43395 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF3O43395 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF3O43395 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF3O43395 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 FGF7P2-201ENST00000332473 296 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 RNU5F-6P-201ENST00000362979 116 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 Y_RNA.97-201ENST00000363094 102 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 RNY3P10-201ENST00000384764 102 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 RPS7P13-201ENST00000413955 498 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 MTCO3P12-201ENST00000416718 547 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 RPL21P32-201ENST00000419877 477 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AL137014.1-201ENST00000420490 1226 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC244098.2-201ENST00000422068 99 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 C4BPAP2-201ENST00000428434 478 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF3O43395 AC096638.2-201ENST00000434965 711 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 LARP1BP3-201ENST00000437229 869 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF3O43395 AC069285.2-201ENST00000440210 275 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AL360221.1-201ENST00000445989 335 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 COX6CP12-201ENST00000446748 202 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 FGF7P3-201ENST00000454645 303 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 RPL36AP13-201ENST00000457490 317 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 HMGB3P30-201ENST00000457863 606 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 UBDP1-202ENST00000457888 382 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF3O43395 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF3O43395 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF3O43395 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC112204.1-201ENST00000502591 103 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC108064.1-201ENST00000513791 460 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 RNU6-1003P-201ENST00000517099 105 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC025881.1-201ENST00000518851 512 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF3O43395 AC103783.1-201ENST00000520506 373 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF3O43395 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF3O43395 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 U73023.1-201ENST00000603134 700 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC064872.1-201ENST00000604823 1072 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC103710.4-201ENST00000609301 899 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF3O43395 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.77□□□□□ -1.65
PRPF3O43395 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 AL390237.1-201ENST00000404226 1415 ntBASIC4.77□□□□□ -1.65
PRPF3O43395 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF3O43395 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.77□□□□□ -1.65
PRPF3O43395 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRPF3O43395 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF3O43395 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF3O43395 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF3O43395 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PRPF3O43395 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF3O43395 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF3O43395 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PRPF3O43395 RNU6-1249P-201ENST00000363237 111 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRPF3O43395 Y_RNA.436-201ENST00000384097 102 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PRPF3O43395 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF3O43395 AL513174.1-201ENST00000423182 629 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF3O43395 AL358472.1-201ENST00000431295 329 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AC091390.1-201ENST00000433904 331 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 MTND4LP10-201ENST00000435146 291 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.76□□□□□ -1.65
PRPF3O43395 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF3O43395 RPL7P36-201ENST00000444633 681 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 TAF9P1-201ENST00000445421 515 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AC239367.2-201ENST00000447309 705 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AL592447.1-201ENST00000447592 540 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 TAF9P2-201ENST00000454958 515 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 SNRPGP9-201ENST00000456025 225 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 RPL23AP41-201ENST00000484754 458 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AC068724.1-201ENST00000487100 792 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 RN7SL604P-201ENST00000492589 296 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AC091435.1-201ENST00000505442 584 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AC023141.12-201ENST00000512399 199 ntBASIC4.76□□□□□ -1.65
PRPF3O43395 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.76□□□□□ -1.65
PRPF3O43395 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.76□□□□□ -1.65
PRPF3O43395 RNU7-143P-201ENST00000516781 65 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms